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  1. herbarium-spectra herbarium-spectra Public

    Trait estimation and taxonomic discrimination of herbarium leaves with spectra.

    R 2

  2. psmc-pipeline psmc-pipeline Public

    Pipeline for pulling NCBI genome assemblies and SRA data, calling SNPs, running and plotting PSMC.

    Shell 1

  3. cocawgs-snparcher cocawgs-snparcher Public

    Reproducible SNP-based population genomics analyses of coca (Erythroxylum) using snpArcher, with versioned configs and cluster run scripts

    Python

  4. dryas-gdi dryas-gdi Public

    Worflow for estimating gdi across chromosomes calculated from simulated gene trees and BPP demographic models