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version bump

version bump #2977

name: '[test] unit test'
on: [push]
jobs:
unit-tests:
runs-on: ubuntu-20.04 # use ubuntu-latest when python 3.7 is dropped
env:
# unit tests should not need tokens
# KEYCLOAK_CLIENT_ID: ${{ secrets.KEYCLOAK_CLIENT_ID }}
# KEYCLOAK_CLIENT_SECRET: ${{ secrets.KEYCLOAK_CLIENT_SECRET }}
SIIBRA_LOG_LEVEL: DEBUG
strategy:
fail-fast: false
matrix:
python-version: [ '3.10', '3.9', '3.8', '3.7' ]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install -U .
pip install -r requirements-test.txt
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
- name: Lint with flake8
run: |
# stop the build if there are Python syntax errors or undefined names
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Install test dependencies
run: pip install pytest pytest-cov coverage
- name: Run test with pytest
run: |
echo "Using github.ref: $GITHUB_REF"
if [[ "$GITHUB_REF" != "refs/heads/main" ]]
then
export FAST_RUN=1
fi
pytest -rx
e2e-tests:
runs-on: ${{ matrix.os }}
env:
# KEYCLOAK_CLIENT_ID: ${{ secrets.KEYCLOAK_CLIENT_ID }}
# KEYCLOAK_CLIENT_SECRET: ${{ secrets.KEYCLOAK_CLIENT_SECRET }}
FOO: BAR
strategy:
fail-fast: false
matrix:
os: [ 'ubuntu-20.04', 'windows-latest' ] # use ubuntu-latest when python 3.7 is dropped
python-version: [ '3.10', '3.9', '3.8', '3.7' ]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Cache SIIBRA_CACHEDIR
uses: actions/cache@v3
with:
path: ${{ runner.temp }}
key: ${{ runner.os }}
restore-keys: |
${{ runner.os }}
- name: Install dependencies
shell: bash
run: |
python -m pip install --upgrade pip
python -m pip install -U .
pip install -r requirements-test.txt
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
- name: Install test dependencies
run: pip install pytest pytest-cov coverage
- name: Run test with pytest
shell: bash
run: |
export SIIBRA_CACHEDIR=${{ runner.temp }}
echo "Using github.ref: $GITHUB_REF"
if [[ "$GITHUB_REF" != "refs/heads/main" ]]
then
export FAST_RUN=1
fi
pytest -rx e2e
check-importable:
runs-on: ubuntu-20.04 # use ubuntu-latest when python 3.7 is dropped
env:
KEYCLOAK_CLIENT_ID: ${{ secrets.KEYCLOAK_CLIENT_ID }}
KEYCLOAK_CLIENT_SECRET: ${{ secrets.KEYCLOAK_CLIENT_SECRET }}
strategy:
fail-fast: false
matrix:
python-version: [ '3.10', '3.9', '3.8', '3.7' ]
steps:
- uses: actions/checkout@v3
- name: Set up Python
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install -U .
- name: cd to / and try to import
run: |
cd / && python -c 'import siibra'