v0.16.2

GeophysicalFlows v0.16.2

Diff since v0.16.1

Merged pull requests:

• Add two papers in list of "papers using GeophysicalFlows.jl" (#353) (@navidcy)
• Fix typo in doi link (#354) (@navidcy)
• Add Parfenyev et al 2024 (#355) (@navidcy)
• Add more refs (#357) (@navidcy)
• Update Shokar et al. (2024) (#358) (@navidcy)
• Add background zonal flow U or U(y) in the SingleLayerQG module (#360) (@mncrowe)
• Update papers using GeophysicalFlows.jl list (#363) (@navidcy)
• Update papers using GeophysicalFlows (#364) (@navidcy)

Closed issues:

• Add background flow functionality in SingleLayerQG model (#359)
• Add Pudig & Smith 2024 in the papers list (#362)

v0.16.1

GeophysicalFlows v0.16.1

Diff since v0.16.0

Merged pull requests:

• Add reference for LaCasce et al. 2024 (#347) (@navidcy)
• Use Julia v1.10 for CI and building Docs (#348) (@navidcy)
• Update Parfenyev 2024 reference (#349) (@navidcy)
• Use randn! for stochastic forcing implementations (#351) (@navidcy)
• Bump patch release (#352) (@navidcy)

Closed issues:

• Issue with stochastic forcing implementation on GPU (#350)

v0.16.0

GeophysicalFlows v0.16.0

Diff since v0.15.3

Merged pull requests:

• Add references in the Docs via DocumenterCitations.jl (#334) (@navidcy)
• Add SLT preprint (#336) (@navidcy)
• Docs dev appear just after stable in the list of available versions (#338) (@navidcy)
• Add compat entries for Standard Library (#340) (@navidcy)
• Add Parfenyev (2022, 2023) papers (#341) (@navidcy)
• Add Bischoff and Deck (2023) (#342) (@navidcy)
• Accepting buoyancy instead of density in MultiLayerQG module (#343) (@mpudig)
• Update Drivas & Elgindi ref (#345) (@navidcy)
• Bump compat for FourierFlows + CUDA v5 (#346) (@navidcy)

Closed issues:

• Add citations in the Docs via DocumenterCitations.jl (#333)
• Mistake in stretching matrix in multilayerqg.jl (#339)

v0.15.4

GeophysicalFlows v0.15.4

Diff since v0.15.3

Merged pull requests:

• Add references in the Docs via DocumenterCitations.jl (#334) (@navidcy)
• Add SLT preprint (#336) (@navidcy)
• Docs dev appear just after stable in the list of available versions (#338) (@navidcy)
• Add compat entries for Standard Library (#340) (@navidcy)
• Add Parfenyev (2022, 2023) papers (#341) (@navidcy)
• Add Bischoff and Deck (2023) (#342) (@navidcy)
• Update Drivas & Elgindi ref (#345) (@navidcy)
• Bump compat for FourierFlows + CUDA v5 (#346) (@navidcy)

Closed issues:

• Add citations in the Docs via DocumenterCitations.jl (#333)
• Mistake in stretching matrix in multilayerqg.jl (#339)

v0.15.3

GeophysicalFlows v0.15.3

Diff since v0.15.2

Merged pull requests:

• Bit of cleanup and using views in MultiLayerQG module (#293) (@navidcy)
• Fixing sign error for mean meridional PV gradient Qy in MultiLayerQG module (#329) (@mjclobo)
• Add Julia v1.9 on CI (#330) (@navidcy)
• Add Siegelman & Young 2023 + use Documenter v1 (#332) (@navidcy)

Closed issues:

• Stratified Flows module (#93)
• Convert diagnostics output for MultiLayerQG from Arrays to Tuples? (#273)
• Sign error for mean PV gradient Qy in MultiLayerQG module (#328)

v0.15.2

GeophysicalFlows v0.15.2

Diff since v0.15.1

Closed issues:

• Should we be passing forcing_spectrum as argument into calcF!? (#299)

Merged pull requests:

• Enforce paper title capitalization in bibtex entry (#315) (@navidcy)
• Faster and with reduced memory allocations calcF! function in examples with stochastic noise (#316) (@navidcy)
• Remove a stray space (#318) (@navidcy)
• Test on julia 1.8 (#320) (@navidcy)
• Update paper citation (#321) (@jbisits)
• Fix multilayer example @id label (#322) (@navidcy)
• Add palinstrophy diagnostic in TwoDNavierStokes (#323) (@navidcy)

v0.15.1

GeophysicalFlows v0.15.1

Diff since v0.15.0

Closed issues:

• Option to specify PV gradients explicitly rather than computing them spectrally (#307)

Merged pull requests:

• Use Makie for plots in Docs/Stochastic Forcing + new Docs/Vizualize output section + fix some docstrings (#306) (@navidcy)
• Adds papers that use GeophysicalFlows.jl (#309) (@navidcy)
• Fix normalization from uh -> ûₖ (#312) (@navidcy)
• Option to specify topographic PV large-scale gradients in MultiLayerQG (#313) (@apaloczy)
• Add warning for using MultiLayerQG with single fluid layer (#314) (@navidcy)

v0.15.0

GeophysicalFlows v0.15.0

Diff since v0.14.2

Merged pull requests:

• Docs delete .jld2 files after build (#300) (@navidcy)
• Clean up docs before deploy (#301) (@navidcy)
• Delete .jld2 file when we are done (#302) (@navidcy)
• Force push when deploying Docs (#303) (@navidcy)
• Update to latest grid refactor (#305) (@navidcy)

v0.14.2

GeophysicalFlows v0.14.2

Diff since v0.14.1

Closed issues:

• Plots no longer accepts functions as clims (#261)
• Demonstrate save/load output functionality in an example (#269)
• enstrophy and cuda problem (#296)

Merged pull requests:

• Convert example to use Makie.jl instead of Plots.jl + add links to examples in Docs/Modules (#288) (@navidcy)
• Update/fix docstrings (#291) (@navidcy)
• Convert arrays to proper format depending on device (#297) (@navidcy)
• Require FourierFlows 0.9.2 (#298) (@navidcy)

v0.14.1

GeophysicalFlows v0.14.1

Diff since v0.14.0

Closed issues:

• م (#287)
• Potential missing factor in MultiLayerQG.energies (#292)

Merged pull requests:

• Add comment regarding installing CUDA in examples that require it (#285) (@navidcy)
• Cancel previous docs built (#286) (@navidcy)
• CompatHelper: bump compat for DocStringExtensions to 0.9, (keep existing compat) (#289) (@github-actions[bot])
• Fix MultilayerQG tests on GPU (#290) (@navidcy)
• Fix potential energy calculation bug in MultiLayerQG.energies (#294) (@apaloczy)