Skip to content

Merge pull request #94 from FredHutch/update-readme-vignette-building #87

Merge pull request #94 from FredHutch/update-readme-vignette-building

Merge pull request #94 from FredHutch/update-readme-vignette-building #87

Workflow file for this run

# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master, develop]
pull_request:
branches: [main, master, develop]
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}
- {os: ubuntu-latest, r: '4.0.4', pandoc-version: '2.11.4'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
steps:
- uses: actions/checkout@v4
- name: Setup statsrv pandoc
if: ${{ matrix.config.r == '4.0.4' }}
uses: r-lib/actions/setup-pandoc@v2
with:
pandoc-version: ${{ matrix.config.pandoc-version }}
- name: Setup default pandoc
if: ${{ matrix.config.r != '4.0.4' }}
uses: r-lib/actions/setup-pandoc@v2
- name: Set up tinytex
uses: r-lib/actions/setup-tinytex@v2
- name: Preinstall required latex packages
run: >
tlmgr install
lastpage morefloats parskip pdflscape textpos multirow lipsum
fancyhdr colortbl soul setspace relsize makecell threeparttable
threeparttablex environ trimspaces
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
- name: Install statsrv packages
if: ${{ matrix.config.r == '4.0.4' }}
run: |
R -q -e 'utils::install.packages("remotes")'
R -q -e 'remotes::install_version("Hmisc", "4.5-0")'
R -q -e 'remotes::install_github("FredHutch/VISCfunctions", dependencies = TRUE)'
R -q -e 'utils::install.packages("rcmdcheck")'
- uses: r-lib/actions/setup-r-dependencies@v2
if: ${{ matrix.config.r != '4.0.4' }}
with:
extra-packages: any::rcmdcheck
needs: check
- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")'