Merge pull request #56 from FredHutch/cellLineRequired #211
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# Candace Savonen Jan 2024 | |
name: Render vignette with Docker image | |
on: | |
workflow_dispatch: | |
pull_request: | |
branches: [ main, staging ] | |
push: | |
branches: [ main, staging ] | |
paths: | |
- R/* | |
- inst/extdata/* | |
jobs: | |
render-vignette: | |
name: Render test | |
runs-on: ubuntu-latest | |
container: | |
image: cansav09/gimap | |
steps: | |
- name: checkout | |
uses: actions/checkout@v3 | |
with: | |
fetch-depth: 0 | |
- name: Login as jhudsl-robot | |
run: | | |
git config --global --add safe.directory $GITHUB_WORKSPACE | |
git config --global user.email "itcrtrainingnetwork@gmail.com" | |
git config --global user.name "jhudsl-robot" | |
- name: Run vignette | |
run: Rscript -e "rmarkdown::render('vignettes/getting-started.Rmd')" | |
# Commit the rendered bookdown files | |
- name: Commit rendered files | |
env: | |
GH_PAT: ${{ secrets.GH_PAT }} | |
run: | | |
git remote set-url origin https://${GH_PAT}@github.com/${GITHUB_REPOSITORY} | |
git fetch origin | |
git add --force docs/* | |
git commit -m 'Render vignette' || echo "No changes to commit" | |
git pull --allow-unrelated-histories --strategy-option=ours | |
git push -u origin main || echo "No changes to push" |