add diagnostic echos

MannLabs · Oct 16, 2024 · 0d223fc · 0d223fc
1 parent fb6e422
commit 0d223fc
Showing 1 changed file with 3 additions and 0 deletions.
diff --git a/tests/run_quicktests.sh b/tests/run_quicktests.sh
@@ -2,8 +2,11 @@ conda activate directlfq
 pip install pytest
 pip install nbmake==1.5.3
 pip install alphabase>=1.2.1
+echo "Current working directory before cd $(pwd)"
 cd quicktests
+echo "Current working directory after cd $(pwd)"
 pytest --nbmake run_pipeline_w_different_input_formats.ipynb
+echo "Current working directory after cd and nb execution $(pwd)"
 directlfq lfq -i ../../test_data/system_tests/quicktests/diann/shortened_input.tsv
 cd ..
 conda deactivate