Fixes

MurrellGroup · Nov 5, 2023 · b44e778 · b44e778
1 parent 92ca498
commit b44e778
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Showing 3 changed files with 4 additions and 4 deletions.
diff --git a/src/assign.jl b/src/assign.jl
@@ -1,3 +1,5 @@
+export assign_secondary_structure!, assign_secondary_structure
+
 function assign_secondary_structure! end
 
 """

diff --git a/src/dssp.jl b/src/dssp.jl
@@ -1,7 +1,5 @@
 # Ported from https://github.com/ShintaroMinami/PyDSSP
 
-export dssp
-
 using LinearAlgebra
 using PaddedViews
 

diff --git a/test/runtests.jl b/test/runtests.jl
@@ -24,13 +24,13 @@ ss_composition(ss::Vector{Int}) = [count(==(i), ss) for i in 1:3]
     @testset "DSSP" begin
 
         @testset "1ASS" begin
-            ss = dssp("data/1ASS.pdb")
+            ss = assign_secondary_structure("data/1ASS.pdb")
             @test length(ss) == 1
             @test ss_composition.(ss) == [[60, 53, 39]]
         end
 
         @testset "1ZAK" begin
-            ss = dssp("data/1ZAK.pdb")
+            ss = assign_secondary_structure("data/1ZAK.pdb")
             @test length(ss) == 2
             @test ss_composition.(ss) == [[72, 116, 32], [72, 116, 32]]
         end