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17 Open 19 Closed
17 Open 19 Closed
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Issues list

need to fork snsxt into more generic framework low priority
#37 opened Nov 20, 2017 by stevekm
refactor 'task_lists' into 'pipelines' important
#35 opened Nov 20, 2017 by stevekm
3 tasks
SnsWESAnalysisOutput class not compatible with other sns pipeline outputs bug important
#34 opened Nov 18, 2017 by stevekm
2
need small datasets for testing important
#33 opened Nov 17, 2017 by stevekm
2 tasks
refactor sns_task submodule names low priority
#30 opened Nov 15, 2017 by stevekm
refactor analysis report to utilize sns analysis steps important
#29 opened Nov 14, 2017 by stevekm
1
Move binary configs to parent directory
#27 opened Nov 14, 2017 by stevekm
Move log dir to parent directory
#26 opened Nov 14, 2017 by stevekm
2
Separate log file for each analysis, sample, and task low priority
#25 opened Nov 14, 2017 by stevekm
Integrate QC checks in reports and program output important
#24 opened Nov 14, 2017 by stevekm
Need running tasks to kill their jobs on error important
#21 opened Nov 11, 2017 by stevekm
@stevekm
4
Need backup email notification in case of email send failure enhancement low priority
#20 opened Nov 11, 2017 by stevekm
@stevekm
need to adjust log message levels enhancement good first issue
#17 opened Nov 10, 2017 by stevekm
2 of 3 tasks
1
@stevekm @varshini712
2
Skip analysis task if output already exists enhancement important
#15 opened Nov 9, 2017 by stevekm
@stevekm
1
Travis CI not reporting failed tests bug important
#13 opened Nov 2, 2017 by stevekm
@stevekm
1
Include CNV analysis important
#5 opened Oct 17, 2017 by stevekm
@stevekm @varshini712
Return error code or process object from subprocess functions enhancement
#3 opened Oct 12, 2017 by stevekm
@stevekm
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