Skip to content

Issues: OpenTreeOfLife/otcetera

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

37 Open 23 Closed
37 Open 23 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

add API option to download simplified newick
#123 opened May 30, 2024 by mtholder
Broken taxon weirdness
#122 opened Jan 19, 2024 by snacktavish
support for newer, but backward compatible taxonomy OR better error message
#121 opened Sep 25, 2023 by mtholder
taxon forwards missing from synth
#116 opened Apr 18, 2022 by snacktavish
3
differentiate support for tips in study
#115 opened Apr 15, 2022 by snacktavish
include amendents for mapping on the fly
#113 opened Mar 21, 2022 by snacktavish
add option for subtree to simplify names on the fly
#112 opened Jan 24, 2022 by mtholder
synth node mrca labels not returned
#111 opened Jan 13, 2022 by snacktavish
18
If you give a broken ottID to node_info, it returns the MRCA
#110 opened Oct 13, 2021 by bredelings
TNRS approximate matching on multiple names not working if any name is an exact match.
#109 opened Sep 14, 2021 by mtholder
@bredelings
Easylogging is out-of-date, but new version crashes
#106 opened Feb 18, 2021 by bredelings
2
taxon info needs to report suppressed from synth correctly
#104 opened Nov 19, 2020 by mtholder
3
otcetera segfaults when killed with ^C
#100 opened Sep 30, 2020 by bredelings
support download on tree with taxonomy-only stripped
#87 opened Jan 3, 2020 by mtholder
more expansive supporting_studies attribute in subtree
#86 opened Dec 11, 2019 by mtholder
Induced subtree call fails on pruned taxa
#84 opened Nov 7, 2019 by snacktavish
8
Make ccache work with clang in travis
#78 opened Oct 9, 2019 by bredelings
Create a new testcase so we can test info about contesting trees.
#77 opened Oct 8, 2019 by bredelings
Fix py_env failing in travis tests.
#75 opened Oct 8, 2019 by bredelings
speed up boot time of otc-tol-ws
#71 opened Sep 22, 2019 by mtholder
Synonymized taxa in induced subtree
#61 opened Apr 25, 2019 by snacktavish
@bredelings
5
Speed up subproblem solver using faster version of BUILD for trees
#59 opened Apr 15, 2019 by bredelings
4
Implement buik node_info processing
#58 opened Apr 11, 2019 by bredelings
Make mrca and induced_subtree return all failing IDs intead of just one
#57 opened Apr 11, 2019 by bredelings
Return multiple witnesses for conflict queries.
#56 opened Apr 11, 2019 by bredelings
ProTip! Follow long discussions with comments:>50.