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Issues: OpenTreeOfLife/phylesystem-api

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60 Open 72 Closed
60 Open 72 Closed
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Issues list

need to have a tip-labeling option for tree-viewer friendliness
#265 opened Mar 19, 2024 by mtholder
some efficiency issues
#256 opened Jul 28, 2023 by mtholder
Re-locate nudge study index
#239 opened Jul 7, 2023 by snacktavish
4
slow find_collections
#236 opened Jan 10, 2023 by mtholder
1
Add collection IDs and SHAs to /tree_of_life/about (verbose response)
#228 opened Dec 3, 2020 by jimallman
@mtholder @bredelings @snacktavish
1
error on empty find_collections
#226 opened Apr 14, 2020 by mtholder
Missing line break in Nexus file
#217 opened Apr 13, 2017 by josephwb
1
Unexpected values for branchLength* for trees with no branch lengths question
#209 opened Nov 2, 2016 by josephwb
service to return set of trees included in the synthesis collections
#207 opened Oct 31, 2016 by kcranston
3
double check api behavior when getting just mapped tips
#206 opened Oct 24, 2016 by mtholder
get ready for new otindex add / update / remove study methods
#205 opened Oct 17, 2016 by kcranston
test_external_url.py is failing
#202 opened Oct 9, 2016 by jar398
1
Preserve helpful responses in cache
#200 opened Oct 6, 2016 by jimallman
Structured way to make 'out of band' changes to phylesystem
#193 opened Oct 2, 2016 by jar398
NexSON syntax for tree synthesis status
#191 opened Sep 26, 2016 by kcranston
22
Need a method that reserves a range of ids without writing an amendments file
#190 opened Sep 19, 2016 by jar398
URLs for amendment service methods
#189 opened Sep 8, 2016 by jar398
2
Should get the NHX info into the nexson in some way
#186 opened Aug 18, 2016 by mtholder
2
Should add an "Add non-nexson tree to study" API function
#185 opened Aug 18, 2016 by mtholder
should migrate import from non-NEXUS formats to phylesystem-api
#184 opened Aug 18, 2016 by mtholder
Subtree method with nexson doesn't work
#180 opened Jun 15, 2016 by josephwb
3
Update code to support host-only API base URLs bug
#176 opened May 5, 2016 by jimallman
@jimallman
2
we need a few special case collection edit methods
#175 opened Apr 30, 2016 by mtholder
10
Web service to sync server's repo with github's repo enhancement
#174 opened Apr 14, 2016 by jar398
3
Update/migrate detailed api docs
#173 opened Feb 21, 2016 by snacktavish
@snacktavish
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