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skip conflicting poetry install
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fbdtemme committed Sep 13, 2023
1 parent b9042f6 commit 06ac38a
Showing 1 changed file with 3 additions and 10 deletions.
13 changes: 3 additions & 10 deletions .github/workflows/integration-tests.yml
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@ on:
container-tag:
description: 'Container tag'
required: true
default: 'latest-dev'
default: 'dev'
keep-workdirs:
description: 'Keep working directories for debugging'
required: false
Expand Down Expand Up @@ -78,7 +78,7 @@ jobs:
runs-on: ubuntu-latest
needs: [setup]
container:
image: 890888997283.dkr.ecr.eu-north-1.amazonaws.com/pixelator:${{ github.event.inputs.container-tag || 'latest-dev' }}
image: 890888997283.dkr.ecr.eu-north-1.amazonaws.com/pixelator:${{ github.event.inputs.container-tag || 'dev' }}
credentials:
username: ${{ needs.setup.outputs.docker_username }}
password: ${{ needs.setup.outputs.docker_password }}
Expand All @@ -91,18 +91,11 @@ jobs:
# test: [ "small", "single-cell", "tissue" ]

steps:
- name: Install poetry
run: |
python -m pip install --user pipx
python -m pipx ensurepath
pipx install poetry
poetry self add poetry-plugin-export
- name: Install dev dependencies
working-directory: /pixelator
run: |
poetry export -f requirements.txt --output requirements_only_dev.txt --only dev
pip3 install -r requirements_only_dev.txt
pip install -r requirements_only_dev.txt
- name: Prepare test case string
uses: actions/github-script@v6
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