Merge pull request #32 from ScilifelabDataCentre/Paul/FREYA-723

FREYA-723 :: Add serology python paths to 10mins runner
ScilifelabDataCentre · Jul 1, 2024 · 925e22e · 925e22e
2 parents 987e66b + 79a2a69
commit 925e22e
Showing 1 changed file with 4 additions and 0 deletions.
diff --git a/runner_every10mins.sh b/runner_every10mins.sh
@@ -14,6 +14,10 @@ PYTHONPATH="$CODE_PATH"/pathogens-portal-visualisations/wastewater python "$CODE
 PYTHONPATH="$CODE_PATH"/pathogens-portal-visualisations/wastewater python "$CODE_PATH"/pathogens-portal-visualisations/wastewater/combined_slu_influenza_a.py > "$CODE_PATH"/output/wastewater_slu_infA.json
 PYTHONPATH="$CODE_PATH"/pathogens-portal-visualisations/wastewater python "$CODE_PATH"/pathogens-portal-visualisations/wastewater/combined_slu_influenza_b.py > "$CODE_PATH"/output/wastewater_slu_infB.json
 
+# Serology
+PYTHONPATH="$CODE_PATH"/pathogens-portal-visualisations/serology python "$CODE_PATH"/pathogens-portal-visualisations/serology/weekly-serology-tests.py > "$CODE_PATH"/output/weekly_serology_tests.json
+PYTHONPATH="$CODE_PATH"/pathogens-portal-visualisations/serology python "$CODE_PATH"/pathogens-portal-visualisations/serology/cumulative-serology-tests.py > "$CODE_PATH"/output/cumulative_serology_tests.json
+
 
 # Upload generated files
 for filename in $(ls $CODE_PATH/output) ; do