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chore: typo in tutorial light protocol
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mihai-sysbio committed Jan 12, 2024
1 parent fa87489 commit 83412ed
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions tutorials/light_ecModel/protocol.m
Original file line number Diff line number Diff line change
Expand Up @@ -74,7 +74,7 @@
% STEP 26 Merge BRENDA and DLKcat derived values
kcatList_merged = mergeDLKcatAndFuzzyKcats(kcatList_DLKcat, kcatList_fuzzy);

% STEP 27 Implement kcat avlues into model.ec.kcat
% STEP 27 Implement kcat values into model.ec.kcat
ecModel = selectKcatValue(ecModel,kcatList_merged);

% STEP 28
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% -standardMW/standardKcat as the stoiciometric coefficient.
[ecModel, rxnsMissingGPR, standardMW, standardKcat] = getStandardKcat(ecModel);

% STEP 31 Apply kcat avlues to S-matrix
% STEP 31 Apply kcat values to S-matrix
% In light ecModels the kcat values are also kept in ecModels.ec.kcat, and
% only after running applyKcatConstraints are these introduced in the
% ecModel.S matrix. In constrast to full ecModels, the applyKcatConstraints
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