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remove dependency on depricated package:goodpractice, very minor chan…
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…ge to roxygen2 documentation for aqs_sampledurations
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mccroweyclinton-EPA committed May 15, 2024
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1 change: 1 addition & 0 deletions .Rbuildignore
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Expand Up @@ -46,3 +46,4 @@ codemeta.json
^.tar.gz
^.zip
^CITATION\.cff$
^RAQSAPI\.code-workspace$
4 changes: 2 additions & 2 deletions .github/workflows/R-CMD-check.yaml
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Expand Up @@ -26,8 +26,8 @@ jobs:

env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
RAQSAPIKEY: ${{ secrets.RAQSAPIKEY }}
RAQSAPIUSERNAME: ${{ secrets.RAQSAPIUSERNAME }}
RAQSAPIKEY: "${{ secrets.RAQSAPIKEY }}"
RAQSAPIUSERNAME: "${{ secrets.RAQSAPIUSERNAME }}"
R_KEEP_PKG_SOURCE: yes

steps:
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1 change: 1 addition & 0 deletions .gitignore
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Expand Up @@ -55,3 +55,4 @@ dev/.experimental.R
# RAQSAPI package files
*.tar.gz
*.zip
RAQSAPI.code-workspace
27 changes: 1 addition & 26 deletions CITATION.cff
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Expand Up @@ -2,7 +2,7 @@
# CITATION file created with {cffr} R package, v0.5.0
# See also: https://docs.ropensci.org/cffr/
# -----------------------------------------------------------

cff-version: 1.2.0
message: 'To cite package "RAQSAPI" in publications use:'
type: software
Expand Down Expand Up @@ -274,31 +274,6 @@ references:
email: jenny@rstudio.com
orcid: https://orcid.org/0000-0002-6983-2759
year: '2023'
- type: software
title: goodpractice
abstract: 'goodpractice: Advice on R Package Building'
notes: Suggests
url: https://github.com/mangothecat/goodpractice
repository: https://CRAN.R-project.org/package=goodpractice
authors:
- family-names: Marks
given-names: Karina
email: karina.marks@ascent.io
- family-names: de Bortoli
given-names: Daniel
- family-names: Csardi
given-names: Gabor
email: csardi.gabor@gmail.com
- family-names: Frick
given-names: Hannah
email: hannah.frick@gmail.com
- family-names: Jones
given-names: Owen
email: owenjonesuob@gmail.com
- family-names: Alexander
given-names: Hannah
email: halexander@mango-solutions.com
year: '2023'
- type: software
title: keyring
abstract: 'keyring: Access the System Credential Store from R'
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1 change: 0 additions & 1 deletion DESCRIPTION
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Expand Up @@ -63,7 +63,6 @@ Imports:
Suggests:
covr,
devtools,
goodpractice,
keyring,
knitr,
markdown,
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23 changes: 12 additions & 11 deletions MD5
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@@ -1,12 +1,12 @@
2d3e0e574783202b33c52d6feba58dd3 *CITATION.cff
d3a7f7cc6aca27a043309d5bf9f32edc *codemeta.json
bfa24dfc7e0f2f217163fa917e8d2392 *cran-comments.md
bfa24dfc7e0f2f217163fa917e8d2392 *cran-comments.Rmd
32b197cb6b7fa3ce90996cf9cad52d01 *DESCRIPTION
3fe0b2d4c41b6a7ddea1fcc2dc0742a0 *CITATION.cff
f4ff2345ea66f98028bea8e07bb9b6fa *codemeta.json
6e5839d0c24939143566d26d7f427fce *cran-comments.md
6e5839d0c24939143566d26d7f427fce *cran-comments.Rmd
d4d029fe53e81834a1917cfedb301963 *DESCRIPTION
1dc95961c4c280f8645a65d15662725f *dev/contributing.md
4fc13def6ec5d889261f1f22a13ba542 *dev/contributing.Rmd
74e297a0dc0b508ed18e3821264958d0 *dev/countlinesofcode.R
f6d9a7f697a65fba336f96fa8db1e24b *dev/install_RAQSAPI.R
c7475d24c66f403e4d930e4d99750f66 *dev/install_RAQSAPI.R
3c41777493d242206848842b6ba74fde *inst/CITATION
3df907b50c4f00bc26ee6d988e0c849f *inst/codecov.yml
dd65d70b425fb86f7c8b6d8841a837d8 *inst/schemaorg.json
Expand Down Expand Up @@ -91,7 +91,7 @@ a8f79ece8b275d2f60fc09a58239e661 *man/aqs_quarterlysummary_by_site.Rd
4232385c24cb5041c7ad57ec9279a798 *man/aqs_sampledata_by_county.Rd
d6bccf166ae844172cf9b241c89093e2 *man/aqs_sampledata_by_site.Rd
a10c5684e68d35cebb418f849c058609 *man/aqs_sampledata_by_state.Rd
0557bd694ffc18246eda85f4813fc2d1 *man/aqs_sampledurations.Rd
e18bec0d4aa22d14a5c796adc3998d91 *man/aqs_sampledurations.Rd
f9d84d9671e9c011e40dcf3567f3aa47 *man/aqs_services_by_box.Rd
9291322a3bd3a17248904a0bfcf32d2f *man/aqs_services_by_cbsa.Rd
9ca1f01ed3c413b5c8cd1f9f2bec9f3d *man/aqs_services_by_county.Rd
Expand Down Expand Up @@ -129,11 +129,12 @@ d82b1ff8ee144afca1879e5b8dc58840 *R/byma.R
2e6e59d801dc3b6bd5e415ada7268469 *R/bystate.R
5b01d32e630b9b68041a139e4ae6f748 *R/deprecated.R
87275ab3c5bd1af63ecfbd835ea8f53b *R/RAQSAPI-package.R
8bf50a551dbb3798f968436f95e3c343 *R/RAQSAPIlistfunctions.R
cebed24e7ab755d8642a74c7e9b80fd5 *R/RAQSAPIlistfunctions.R
e6e3b87e48f4403642382987b0f40714 *R/setupfunctions.R
6e659bb3bbf313dc819d4c029f0b22d0 *R/zzz.R
25bf50b0ec79d01de8b83b7b5801b4ac *RAQSAPI.code-workspace
a69de5455537022556f014579766be59 *RAQSAPI.Rproj
0a09f7b01761cf3c04560c3dd27ba89a *README.md
f6cb61c1475f001928bd1c27d5d1fcc7 *README.md
b2370e0e3f63a29557cd8f74746d74f6 *README.Rmd
7ed08f3fb96a77ec01c95c2ad7964250 *revdep/data.sqlite
34952a5944548ea4fc132a9899f8e6ab *revdep/email.yml
Expand Down Expand Up @@ -890,7 +891,7 @@ d6c68f1fe41ced6e98a766a3757313da *revdep/library/RAQSAPI/old/R6/R/R6
9a2c1961edcf2968e9e17856ed21f7ce *revdep/library/RAQSAPI/old/R6/R/R6.rdx
5f3c708ae9a7e3610961d99f3375e60f *revdep/library/RAQSAPI/old/RAQSAPI/CITATION
3df907b50c4f00bc26ee6d988e0c849f *revdep/library/RAQSAPI/old/RAQSAPI/codecov.yml
70e30c409e2788090f475bef50b5022f *revdep/library/RAQSAPI/old/RAQSAPI/DESCRIPTION
ee3578e05ac28d372c75425e260fcecb *revdep/library/RAQSAPI/old/RAQSAPI/DESCRIPTION
cf125d5812045cd97093aee831e5c5f5 *revdep/library/RAQSAPI/old/RAQSAPI/doc/Acknowledgements.html
49025d261826350f3050e677eab9dbac *revdep/library/RAQSAPI/old/RAQSAPI/doc/Acknowledgements.Rmd
4b9af1f3b9da96988881ddf1c8d9ee9d *revdep/library/RAQSAPI/old/RAQSAPI/doc/EPA_Disclaimer.html
Expand Down Expand Up @@ -1319,7 +1320,7 @@ b2d403f29050e86e8efa021931ef8649 *revdep/README.md
846f989b5f8b7a32fa520e52b4675635 *tests/test-RAQSAPI.R.blob
84732d71bac50c96565c4894a24ecc59 *tests/testthat.R
89ff48b08754c7fc927acb5b6691bdb1 *tests/testthat/helper.R
d5348436deb0b02017a3f7227ae8e5ab *tests/testthat/local.R
2a4012f9bf99ddc63f745bd8e4f845dc *tests/testthat/local.R
522ea3f8b07f6f4d206ce3fe38f1fbd8 *tests/testthat/test-bybox.R
67192eeb2606380b3c349f08851ef9e6 *tests/testthat/test-byCBSA.R
50d37429e9bf99ad5be17e09d92e16e8 *tests/testthat/test-bycounty.R
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2 changes: 1 addition & 1 deletion R/RAQSAPIlistfunctions.R
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Expand Up @@ -415,7 +415,7 @@ aqs_fields_by_service <- function(service, return_header = FALSE)
#' @description \lifecycle{stable}
#' Returns a table of sample durations and their
#' associated duration codes. Returned values are not calculated
#' durations such as 8 hour CO or O${_3}$ rolling averages, 3/6
#' durations such as 8 hour CO or O$_3$ rolling averages, 3/6
#' day PM averages or Pb 3 month rolling averages.
#' @importFrom magrittr `%<>%`
#' @param return_header If FALSE (default) only returns data requested.
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4 changes: 2 additions & 2 deletions README.md
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Expand Up @@ -39,7 +39,7 @@ status](https://www.r-pkg.org/badges/version/RAQSAPI)](https://CRAN.R-project.or
downloads](https://cranlogs.r-pkg.org/badges/RAQSAPI)](https://cran.r-project.org/package=RAQSAPI)
[![lifecycle](https://img.shields.io/badge/lifecycle-maturing-blue.svg)](https://www.tidyverse.org/lifecycle/#maturing)
[![license](https://img.shields.io/badge/license-CC0-lightgrey.svg)](https://choosealicense.com/)
[![Last-changedate](https://img.shields.io/badge/last%20change-%202024--04--05-yellowgreen.svg)](/commits/master)
[![Last-changedate](https://img.shields.io/badge/last%20change-%202024--05--15-yellowgreen.svg)](/commits/master)
<!-- badges: end -->

# EPA Disclaimer
Expand Down Expand Up @@ -419,7 +419,7 @@ those sources with them RAQSAPI would not be possible.

# References

<div id="refs" class="references csl-bib-body">
<div id="refs" class="references csl-bib-body" entry-spacing="0">

<div id="ref-AQSDataMartWelcome" class="csl-entry">

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12 changes: 0 additions & 12 deletions codemeta.json
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Expand Up @@ -105,18 +105,6 @@
},
"sameAs": "https://CRAN.R-project.org/package=devtools"
},
{
"@type": "SoftwareApplication",
"identifier": "goodpractice",
"name": "goodpractice",
"provider": {
"@id": "https://cran.r-project.org",
"@type": "Organization",
"name": "Comprehensive R Archive Network (CRAN)",
"url": "https://cran.r-project.org"
},
"sameAs": "https://CRAN.R-project.org/package=goodpractice"
},
{
"@type": "SoftwareApplication",
"identifier": "keyring",
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1 change: 1 addition & 0 deletions cran-comments.Rmd
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Expand Up @@ -7,6 +7,7 @@ output: md_document

# cran-comments for RAQSAPI
## RAQSAPI 2.0.5
- remove depricated package:goodpractice from SUGGESTS
- Added the ability to display server side messages for errors in API calls.
- Added a new CITATION.cff for thanks to R package cffr.
- New hexstciker.
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1 change: 1 addition & 0 deletions cran-comments.md
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Expand Up @@ -7,6 +7,7 @@ output: md_document

# cran-comments for RAQSAPI
## RAQSAPI 2.0.5
- remove depricated package:goodpractice from SUGGESTS
- Added the ability to display server side messages for errors in API calls.
- Added a new CITATION.cff for thanks to R package cffr.
- New hexstciker.
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2 changes: 1 addition & 1 deletion man/aqs_sampledurations.Rd

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