Update shinyngs, remove na.omit() from proteus (#3707) #6

Job	Run time
pytest-changes	7s
nf-test-changes	6s
editorconfig	9s
prettier	30s
nf-test	0s
nf-core-lint (proteus/readproteingroups)	1m 6s
nf-core-lint (shinyngs/app)	1m 13s
nf-core-lint (shinyngs/staticdifferential)	1m 2s
nf-core-lint (shinyngs/staticexploratory)	55s
nf-core-lint (shinyngs/validatefomcomponents)	1m 2s
pytest (proteus/readproteingroups, docker)	1m 43s
pytest (proteus/readproteingroups, singularity)	1m 49s
pytest (proteus/readproteingroups, conda)	4m 7s
pytest (shinyngs/app, docker)	1m 42s
pytest (shinyngs/app, singularity)	1m 49s
pytest (shinyngs/app, conda)	4m 1s
pytest (shinyngs/staticdifferential, docker)	2m 8s
pytest (shinyngs/staticdifferential, singularity)	2m 29s
pytest (shinyngs/staticdifferential, conda)	4m 41s
pytest (shinyngs/staticexploratory, docker)	2m 30s
pytest (shinyngs/staticexploratory, singularity)	5m 21s
pytest (shinyngs/staticexploratory, conda)	4m 59s
pytest (shinyngs/validatefomcomponents, docker)	1m 49s
pytest (shinyngs/validatefomcomponents, singularity)	1m 45s
pytest (shinyngs/validatefomcomponents, conda)	4m 5s
confirm-pass	2s
	51m 10s

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