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Move conda-checks (sixth batch) (#3713) #8

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Move conda-checks (sixth batch) (#3713)

Move conda-checks (sixth batch) (#3713) #8

Run time

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Job Run time
nf-test-changes
6s
editorconfig
10s
prettier
25s
pytest-changes
4s
nf-core-lint (bclconvert)
1m 15s
nf-core-lint (concoct/concoct)
1m 11s
nf-core-lint (concoct/concoctcoveragetable)
1m 18s
nf-core-lint (concoct/cutupfasta)
1m 17s
nf-core-lint (concoct/extractfastabins)
1m 6s
nf-core-lint (concoct/mergecutupclustering)
1m 12s
nf-core-lint (famsa/align)
1m 9s
nf-core-lint (merquryfk/ploidyplot)
1m 6s
nf-core-lint (mosdepth)
1m 25s
nf-core-lint (parabricks/applybqsr)
54s
nf-core-lint (parabricks/fq2bam)
1m 17s
nf-core-lint (scimap/mcmicro)
1m 14s
nf-core-lint (sentieon/applyvarcal)
1m 9s
nf-core-lint (sentieon/bwamem)
1m 13s
nf-core-lint (sentieon/datametrics)
1m 10s
nf-core-lint (sentieon/dedup)
1m 17s
nf-core-lint (sentieon/readwriter)
1m 18s
nf-core-lint (seqkit/tab2fx)
52s
pytest (bclconvert, docker)
1m 19s
pytest (bclconvert, singularity)
2m 18s
pytest (concoct/concoct, docker)
1m 48s
pytest (concoct/concoct, singularity)
2m 19s
pytest (concoct/concoct, conda)
4m 6s
pytest (concoct/concoctcoveragetable, docker)
2m 20s
pytest (concoct/concoctcoveragetable, singularity)
2m 48s
pytest (concoct/concoctcoveragetable, conda)
4m 8s
pytest (concoct/cutupfasta, docker)
2m 10s
pytest (concoct/cutupfasta, singularity)
2m 0s
pytest (concoct/cutupfasta, conda)
3m 53s
pytest (concoct/extractfastabins, docker)
2m 46s
pytest (concoct/extractfastabins, singularity)
2m 50s
pytest (concoct/extractfastabins, conda)
4m 41s
pytest (concoct/mergecutupclustering, docker)
1m 53s
pytest (concoct/mergecutupclustering, singularity)
2m 45s
pytest (concoct/mergecutupclustering, conda)
5m 0s
pytest (famsa/align, docker)
1m 33s
pytest (famsa/align, singularity)
1m 39s
pytest (famsa/align, conda)
3m 3s
pytest (merquryfk/ploidyplot, docker)
1m 27s
pytest (merquryfk/ploidyplot, singularity)
3m 51s
pytest (mosdepth, docker)
1m 39s
pytest (mosdepth, singularity)
1m 57s
pytest (mosdepth, conda)
6m 34s
pytest (parabricks/applybqsr, docker)
1m 42s
pytest (parabricks/applybqsr, singularity)
6m 51s
pytest (parabricks/fq2bam, docker)
3m 6s
pytest (parabricks/fq2bam, singularity)
10m 50s
pytest (scimap/mcmicro, docker)
1m 58s
pytest (scimap/mcmicro, singularity)
6m 37s
pytest (sentieon/applyvarcal, docker)
1m 8s
pytest (sentieon/applyvarcal, singularity)
1m 35s
pytest (sentieon/bwamem, docker)
1m 49s
pytest (sentieon/bwamem, singularity)
2m 0s
pytest (sentieon/datametrics, docker)
1m 6s
pytest (sentieon/datametrics, singularity)
1m 7s
pytest (sentieon/dedup, docker)
1m 22s
pytest (sentieon/dedup, singularity)
1m 3s
pytest (sentieon/readwriter, docker)
1m 24s
pytest (sentieon/readwriter, singularity)
1m 44s
pytest (seqkit/tab2fx, docker)
1m 3s
pytest (seqkit/tab2fx, singularity)
1m 29s
pytest (seqkit/tab2fx, conda)
4m 17s
nf-test
0s
confirm-pass
1s
2h 25m 7s