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fix: adapt to varfish-cli >=0.6.2 syntax #221

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merged 1 commit into from
Jan 26, 2024
Merged

fix: adapt to varfish-cli >=0.6.2 syntax #221

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4 changes: 2 additions & 2 deletions cubi_tk/snappy/varfish_upload.py
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Original file line number Diff line number Diff line change
Expand Up @@ -269,8 +269,8 @@ def _process_dataset(self, ds: DataSet):
"varfish-cli",
"--no-verify-ssl",
"--verbose",
"case",
"create-import-info",
"importer",
"caseimportinfo-create",
sodar_uuid,
*sorted(found.values()),
]
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2 changes: 1 addition & 1 deletion requirements/base.txt
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Expand Up @@ -52,7 +52,7 @@ argcomplete
pyyaml

# VarFish REST API client.
varfish-cli >=0.5.1
varfish-cli >=0.6.2,<=0.7.0

# Compact, round-tripable configuration format.
toml
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