Skip to content

Commit

Permalink
Update UMICollapse to 1.1.0 (#51441)
Browse files Browse the repository at this point in the history
* Update UMICollapse to 1.1.0

Also changes the source GitHub repo to another fork. Some discussion on this in nf-core/rnaseq#1087 (comment)

* Reset build number

* Add run_exports
  • Loading branch information
siddharthab authored Oct 17, 2024
1 parent e00e386 commit 4555528
Showing 1 changed file with 9 additions and 7 deletions.
16 changes: 9 additions & 7 deletions recipes/umicollapse/meta.yaml
Original file line number Diff line number Diff line change
@@ -1,17 +1,19 @@
{% set name = "UMICollapse" %}
{% set version = "1.0.0" %}
{% set sha256 = "40685d58f6be844ae4029eff1bf21f886f059da8293902ab390ee872e878edec"%}
{% set name = "umicollapse" %}
{% set version = "1.1.0" %}
{% set sha256 = "01b8ff5b6bcc775b277e92f5414e7e94019bfbe47fe0850810ab4e33500992b1"%}

package:
name: umicollapse
name: {{ name }}
version: {{ version }}

build:
number: 1
number: 0
noarch: generic
run_exports:
- {{ pin_subpackage(name, max_pin="x") }}

source:
url: https://github.com/CharlotteAnne/UMICollapse/archive/refs/tags/v{{ version }}.tar.gz
url: https://github.com/siddharthab/UMICollapse/archive/refs/tags/v{{ version }}.tar.gz
sha256: {{ sha256 }}

requirements:
Expand All @@ -35,4 +37,4 @@ about:
while maintaining similar functionality. This is achieved by using faster data structures with n-grams and BK-trees,
along other techniques that are carefully implemented to scale well to larger datasets and longer UMIs. Users of
UMICollapse have reported speedups from taking hours or days to run with a previous tool to taking only a few
minutes with this tool with real datasets! doi 10.7717/peerj.8275.
minutes with this tool with real datasets! doi 10.7717/peerj.8275.

0 comments on commit 4555528

Please sign in to comment.