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slendr 0.8.1

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@bodkan bodkan released this 15 Jan 15:10
· 469 commits to main since this release
  • Fixed an issue of apparent contradiction in time direction in models where range expansion was scheduled within some time interval together with associated "locked-in" changes in population size over that time interval. (#d2a29e)

  • The introduction of tspop which is only installable via pip (see changelog for the previous version) caused GLIBCXX-related errors between conda and pip dependencies related to the pandas Python package. To work around this issue, setup_env() no longer installs pandas from conda regardless of the setting of the pip = TRUE|FALSE parameter. Instead, pandas is installed via pip in a single step when tspop is being installed. (#cbe960)


WARNING: SLiM 4.1 which has just been released includes a couple of backwards incompatible changes related to the implementation of spatial maps which prevent the current version of slendr's slim() function from working correctly. If you rely on the functionality provided by the slim() function, you will have to use SLiM 4.0. (Note that if you want to have multiple versions of SLiM on your system, you can either use the slim_path = argument of slim() or specify the $PATH to the required version of SLiM in your ~/.Renviron file just like you do under normal circumstances). Porting slendr for SLiM 4.1 is being worked on.