fixup

broadinstitute · May 8, 2024 · aa04a4b · aa04a4b
1 parent 6bc1175
commit aa04a4b
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Showing 2 changed files with 10 additions and 22 deletions.
diff --git a/browser/src/VariantList/mergeExomeAndGenomeData.spec.ts b/browser/src/VariantList/mergeExomeAndGenomeData.spec.ts
@@ -329,11 +329,9 @@ describe('mergeExomeAndGenomeData', () => {
         ac: 10,
         hemizygote_count: 20,
         homozygote_count: 30,
-        fafmax: {
-          faf95_max: null,
-          faf95_max_gen_anc: null,
-          faf99_max: null,
-          faf99_max_gen_anc: null,
+        faf95: {
+          popmax: null,
+          popmax_population: null,
         },
         an: 40,
         filters: ['discrepant_frequencies'],
@@ -390,11 +388,9 @@ describe('mergeExomeAndGenomeData', () => {
         ac: 10,
         hemizygote_count: 20,
         homozygote_count: 30,
-        fafmax: {
-          faf95_max: null,
-          faf95_max_gen_anc: null,
-          faf99_max: null,
-          faf99_max_gen_anc: null,
+        faf95: {
+          popmax: null,
+          popmax_population: null,
         },
         an: 40,
         filters: ['discrepant_frequencies'],
@@ -472,11 +468,9 @@ describe('mergeExomeAndGenomeData', () => {
         hemizygote_count: 20,
         homozygote_count: 30,
         an: 40,
-        fafmax: {
-          faf95_max: null,
-          faf95_max_gen_anc: null,
-          faf99_max: null,
-          faf99_max_gen_anc: null,
+        faf95: {
+          popmax: null,
+          popmax_population: null,
         },
         filters: ['discrepant_frequencies'],
         populations: jointGeneticAncestryGroupObjects,

diff --git a/browser/src/VariantPage/VariantPage.tsx b/browser/src/VariantPage/VariantPage.tsx
@@ -191,6 +191,7 @@ type BaseSequencingType = {
   an: number
   homozygote_count: number
   hemizygote_count: number
+  faf95: Faf95
   filters: Filter[]
   populations: Population[]
   age_distribution: AgeDistribution | null
@@ -202,16 +203,9 @@ export type SequencingType = BaseSequencingType & {
   ac_hom: number
   ac_hemi: number
   af?: number
-  faf95: Faf95
 }
 
 export type JointSequencingType = BaseSequencingType & {
-  fafmax: {
-    faf95_max: number | null
-    faf95_max_gen_anc: PopulationId | null
-    faf99_max: number | null
-    faf99_max_gen_anc: PopulationId | null
-  }
   freq_comparison_stats: {
     contingency_table_test: {
       p_value: number