added the toothpaste_BF2.csv file to the data page

byuistats · Oct 11, 2024 · 9dfc000 · 9dfc000
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diff --git a/data_for_class.qmd b/data_for_class.qmd
@@ -5,3 +5,7 @@ title: "Data Files"
 [click here to download a zipped folder of data for class](data/data_for_class.zip)
 
 then extract the files into a folder somewhere in the project directory you create for this class.
+
+The `toothpaste_BF2.csv` file which is used often throughout the book to demonstrate code, can be downloaded here. (Note, the path used in the book's code to read in the file will be different than the path you will need to read in the file. Your path will depend on where you store the data file on your computer).
+
+[Download toothpaste_bf2.csv](data/toothpaste_BF2.csv)
diff --git a/docs/Anova_F-test.html b/docs/Anova_F-test.html
diff --git a/docs/Anova_F-test_files/figure-html/fig-between_within-1.png b/docs/Anova_F-test_files/figure-html/fig-between_within-1.png
diff --git a/docs/Anova_F-test_files/figure-html/fig-between_within-2.png b/docs/Anova_F-test_files/figure-html/fig-between_within-2.png
diff --git a/docs/ancova.html b/docs/ancova.html
diff --git a/docs/data/toothpaste_BF2.csv b/docs/data/toothpaste_BF2.csv
@@ -0,0 +1,25 @@
+PersonID,Brush,Toothpaste,Plaque
+1,Ultrasonic,NameBrand,32.74
+2,Manual,NameBrand,24.21
+3,Oscillating,OffBrand,22.09
+4,Manual,OffBrand,21.6
+5,Ultrasonic,NameBrand,21.45
+6,Sonic,NameBrand,23.31
+7,Oscillating,NameBrand,19.87
+8,Sonic,OffBrand,23.81
+9,Manual,NameBrand,19.12
+10,Manual,OffBrand,23.4
+11,Ultrasonic,NameBrand,24.39
+12,Ultrasonic,OffBrand,23.42
+13,Sonic,OffBrand,21.27
+14,Oscillating,NameBrand,20
+15,Oscillating,NameBrand,18.56
+16,Manual,NameBrand,26.88
+17,Ultrasonic,OffBrand,24.21
+18,Sonic,NameBrand,25.58
+19,Manual,OffBrand,23.35
+20,Oscillating,OffBrand,17.62
+21,Sonic,NameBrand,18.99
+22,Ultrasonic,OffBrand,25.67
+23,Sonic,OffBrand,23.09
+24,Oscillating,OffBrand,21.72
diff --git a/docs/data_for_class.html b/docs/data_for_class.html
@@ -2,12 +2,12 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.4.553">
+<meta name="generator" content="quarto-1.5.57">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
 
-<title>Math326 Notebook - Data Files</title>
+<title>Data Files – Math326 Notebook</title>
 <style>
 code{white-space: pre-wrap;}
 span.smallcaps{font-variant: small-caps;}
@@ -83,13 +83,13 @@
     </a>
   </div>
             <div id="quarto-search" class="" title="Search"></div>
-          <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbarCollapse" aria-controls="navbarCollapse" aria-expanded="false" aria-label="Toggle navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
+          <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbarCollapse" aria-controls="navbarCollapse" role="menu" aria-expanded="false" aria-label="Toggle navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
   <span class="navbar-toggler-icon"></span>
 </button>
           <div class="collapse navbar-collapse" id="navbarCollapse">
             <ul class="navbar-nav navbar-nav-scroll me-auto">
   <li class="nav-item dropdown ">
-    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-basics-of-design" role="button" data-bs-toggle="dropdown" aria-expanded="false">
+    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-basics-of-design" role="link" data-bs-toggle="dropdown" aria-expanded="false">
  <span class="menu-text">Basics of Design</span>
     </a>
     <ul class="dropdown-menu" aria-labelledby="nav-menu-basics-of-design">    
@@ -120,7 +120,7 @@
     </ul>
   </li>
   <li class="nav-item dropdown ">
-    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-specific-designs" role="button" data-bs-toggle="dropdown" aria-expanded="false">
+    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-specific-designs" role="link" data-bs-toggle="dropdown" aria-expanded="false">
  <span class="menu-text">Specific Designs</span>
     </a>
     <ul class="dropdown-menu" aria-labelledby="nav-menu-specific-designs">    
@@ -167,7 +167,7 @@
     </ul>
   </li>
   <li class="nav-item dropdown ">
-    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-broad-topics" role="button" data-bs-toggle="dropdown" aria-expanded="false">
+    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-broad-topics" role="link" data-bs-toggle="dropdown" aria-expanded="false">
  <span class="menu-text">Broad Topics</span>
     </a>
     <ul class="dropdown-menu" aria-labelledby="nav-menu-broad-topics">    
@@ -206,7 +206,7 @@
     </ul>
   </li>
   <li class="nav-item dropdown ">
-    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-r-instructions" role="button" data-bs-toggle="dropdown" aria-expanded="false">
+    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-r-instructions" role="link" data-bs-toggle="dropdown" aria-expanded="false">
  <span class="menu-text">R Instructions</span>
     </a>
     <ul class="dropdown-menu" aria-labelledby="nav-menu-r-instructions">    
@@ -223,7 +223,7 @@
 </ul>
             <ul class="navbar-nav navbar-nav-scroll ms-auto">
   <li class="nav-item dropdown ">
-    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-datasets" role="button" data-bs-toggle="dropdown" aria-expanded="false">
+    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-datasets" role="link" data-bs-toggle="dropdown" aria-expanded="false">
  <span class="menu-text">Datasets</span>
     </a>
     <ul class="dropdown-menu dropdown-menu-end" aria-labelledby="nav-menu-datasets">    
@@ -239,7 +239,7 @@
   </li>
 </ul>
           </div> <!-- /navcollapse -->
-          <div class="quarto-navbar-tools">
+            <div class="quarto-navbar-tools">
 </div>
       </div> <!-- /container-fluid -->
     </nav>
@@ -248,7 +248,7 @@
 <div id="quarto-content" class="quarto-container page-columns page-rows-contents page-layout-article page-navbar">
 <!-- sidebar -->
 <!-- margin-sidebar -->
-    <div id="quarto-margin-sidebar" class="sidebar margin-sidebar">
+    <div id="quarto-margin-sidebar" class="sidebar margin-sidebar zindex-bottom">
 
     </div>
 <!-- main -->
@@ -275,6 +275,8 @@ <h1 class="title">Data Files</h1>
 
 <p><a href="data/data_for_class.zip">click here to download a zipped folder of data for class</a></p>
 <p>then extract the files into a folder somewhere in the project directory you create for this class.</p>
+<p>The <code>toothpaste_BF2.csv</code> file which is used often throughout the book to demonstrate code, can be downloaded here. (Note, the path used in the book’s code to read in the file will be different than the path you will need to read in the file. Your path will depend on where you store the data file on your computer).</p>
+<p><a href="data/toothpaste_BF2.csv">Download toothpaste_bf2.csv</a></p>
 
 
 
@@ -314,18 +316,7 @@ <h1 class="title">Data Files</h1>
     }
     return false;
   }
-  const clipboard = new window.ClipboardJS('.code-copy-button', {
-    text: function(trigger) {
-      const codeEl = trigger.previousElementSibling.cloneNode(true);
-      for (const childEl of codeEl.children) {
-        if (isCodeAnnotation(childEl)) {
-          childEl.remove();
-        }
-      }
-      return codeEl.innerText;
-    }
-  });
-  clipboard.on('success', function(e) {
+  const onCopySuccess = function(e) {
     // button target
     const button = e.trigger;
     // don't keep focus
@@ -357,15 +348,37 @@ <h1 class="title">Data Files</h1>
     }, 1000);
     // clear code selection
     e.clearSelection();
+  }
+  const getTextToCopy = function(trigger) {
+      const codeEl = trigger.previousElementSibling.cloneNode(true);
+      for (const childEl of codeEl.children) {
+        if (isCodeAnnotation(childEl)) {
+          childEl.remove();
+        }
+      }
+      return codeEl.innerText;
+  }
+  const clipboard = new window.ClipboardJS('.code-copy-button:not([data-in-quarto-modal])', {
+    text: getTextToCopy
   });
+  clipboard.on('success', onCopySuccess);
+  if (window.document.getElementById('quarto-embedded-source-code-modal')) {
+    // For code content inside modals, clipBoardJS needs to be initialized with a container option
+    // TODO: Check when it could be a function (https://github.com/zenorocha/clipboard.js/issues/860)
+    const clipboardModal = new window.ClipboardJS('.code-copy-button[data-in-quarto-modal]', {
+      text: getTextToCopy,
+      container: window.document.getElementById('quarto-embedded-source-code-modal')
+    });
+    clipboardModal.on('success', onCopySuccess);
+  }
     var localhostRegex = new RegExp(/^(?:http|https):\/\/localhost\:?[0-9]*\//);
     var mailtoRegex = new RegExp(/^mailto:/);
       var filterRegex = new RegExp('/' + window.location.host + '/');
     var isInternal = (href) => {
         return filterRegex.test(href) || localhostRegex.test(href) || mailtoRegex.test(href);
     }
     // Inspect non-navigation links and adorn them if external
- 	var links = window.document.querySelectorAll('a[href]:not(.nav-link):not(.navbar-brand):not(.toc-action):not(.sidebar-link):not(.sidebar-item-toggle):not(.pagination-link):not(.no-external):not([aria-hidden]):not(.dropdown-item):not(.quarto-navigation-tool)');
+ 	var links = window.document.querySelectorAll('a[href]:not(.nav-link):not(.navbar-brand):not(.toc-action):not(.sidebar-link):not(.sidebar-item-toggle):not(.pagination-link):not(.no-external):not([aria-hidden]):not(.dropdown-item):not(.quarto-navigation-tool):not(.about-link)');
     for (var i=0; i<links.length; i++) {
       const link = links[i];
       if (!isInternal(link.href)) {