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update to reflect changes in metadata for manuscript preparation #4

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merged 13 commits into from
Oct 17, 2024

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gregcaporaso
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gregcaporaso and others added 11 commits October 8, 2024 08:53
if `export_legend` is enabled, present the legend in the resulting
Visualization.
Note that there was a minor bug in the original version of the
Visualizer - since the conditional was being evaluated after
`export_legend` was cast to a string, it always evaluated to `True`.
Co-authored-by: Liz Gehret <54517601+lizgehret@users.noreply.github.com>
Co-authored-by: Liz Gehret <54517601+lizgehret@users.noreply.github.com>
Co-authored-by: Liz Gehret <54517601+lizgehret@users.noreply.github.com>
Co-authored-by: Liz Gehret <54517601+lizgehret@users.noreply.github.com>
@@ -475,9 +484,16 @@ def plot_pcoa_2d(metadata_fp, ordination_fp, measure,
ax.plot([x0_bulk_mean, x1_mean], [y0_bulk_mean, y1_mean],
'--', color='#C5C9C7', linewidth=0.75, zorder=2)

# handling title text for buckets depending on bucket highlighting
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hey @gregcaporaso i added this segment below to improve the title text - i'll attach a few images to the main PR description so you can see what this looks like. other than this update, everything looks g2g!

@lizgehret
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hey @gregcaporaso here's what the updated title text looks like:

  • no highlighted buckets
    buckets-pcoa
  • single highlighted bucket
    bucket4-pcoa
  • multiple highlighted buckets
    buckets34-pcoa

If you're okay with these changes, this should be ready to merge!

@gregcaporaso
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Looks great, thanks @lizgehret!

@lizgehret lizgehret merged commit 339e969 into main Oct 17, 2024
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@lizgehret lizgehret deleted the merge-me branch October 17, 2024 22:10
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2 participants