Merge pull request #87 from cgat-developers/AC-fixosxtests

trying to get tests to work with osx build. Have added pip and remove…
cgat-developers · Jul 17, 2021 · 17bfba0 · 17bfba0
2 parents 008ef63 + 9824ae5
commit 17bfba0
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diff --git a/.github/workflows/cgatapps_python.yml b/.github/workflows/cgatapps_python.yml
@@ -11,7 +11,7 @@ jobs:
       fail-fast: false
       matrix:
         os: ["ubuntu-latest", "macos-latest"]
-        python-version: ["3.7", "3.8"]
+        python-version: ["3.8"]
 
     defaults:
       run:
@@ -29,7 +29,7 @@ jobs:
           key:
             ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{
             hashFiles('conda/environments/cgat-apps.yml') }}
-      - uses: conda-incubator/setup-miniconda@v2
+      - uses: mamba-org/provision-with-micromamba@main
         with:
           mamba-version: "*"
           python-version: ${{ matrix.python-version }}

diff --git a/conda/environments/cgat-apps.yml b/conda/environments/cgat-apps.yml
@@ -11,7 +11,7 @@ channels:
 
 dependencies:
 # python dependencies
-- python >= 3.6
+- python
 - alignlib-lite
 - biopython<=1.77
 - cython