introduce version numbers in individual models

chaolinzhanglab · Dec 4, 2014 · 42c1a6c · 42c1a6c
1 parent e908577
commit 42c1a6c
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Showing 20 changed files with 55 additions and 0 deletions.
diff --git a/Affy.pm b/Affy.pm
@@ -15,6 +15,9 @@
 
 package Affy;
 
+our $VERSION = 1.01;
+
+
 =head1 NAME
 
 Affy - read and write Affymetrix files

diff --git a/Bed.pm b/Bed.pm
@@ -18,6 +18,8 @@ package Bed;
 
 require Exporter;
 
+our $VERSION = 1.01;
+
 @ISA = qw (Exporter);
 
 @EXPORT = qw (

diff --git a/ClustalW.pm b/ClustalW.pm
@@ -2,6 +2,8 @@ package ClustalW;
 
 require Exporter;
 
+our $VERSION = 1.01;
+
 @ISA = qw (Exporter);
 
 @EXPORT = qw (

diff --git a/Common.pm b/Common.pm
@@ -19,6 +19,10 @@ package Common;
 
 require Exporter;
 
+
+our $VERSION = 1.01;
+
+
 @ISA = qw (Exporter);
 
 @EXPORT = qw (

diff --git a/ESEfinder.pm b/ESEfinder.pm
@@ -144,6 +144,10 @@ use Bio::WebAgent;
 use strict;
 
 use vars qw(@ISA );
+
+
+our $VERSION = 1.01;
+
 #inherits directly from SimpleAnalysisBase
 @ISA = qw(Bio::Tools::Analysis::SimpleAnalysisBase);
 

diff --git a/GeneSymbol.pm b/GeneSymbol.pm
@@ -44,6 +44,9 @@ package GeneSymbol;
 use strict;
 use FileHandle;
 use Common;
+
+our $VERSION = 1.01;
+
 #-------------------------------Globals--------------------------------------# 
 my $symbol_file;
 my $hash;

diff --git a/HMM.pm b/HMM.pm
@@ -9,6 +9,9 @@ use Data::Dumper;
 use Common;
 
 
+our $VERSION = 1.01;
+
+
 =head1 NAME
 
 HMM - Hidden Markov Model

diff --git a/Maf.pm b/Maf.pm
@@ -2,6 +2,10 @@ package Maf;
 
 require Exporter;
 
+
+our $VERSION = 1.01;
+
+
 @ISA = qw (Exporter);
 
 @EXPORT = qw (

diff --git a/MyConfig.pm b/MyConfig.pm
@@ -18,6 +18,8 @@ package MyConfig;
 
 require Exporter;
 
+our $VERSION = 1.01;
+
 @ISA = qw (Exporter);
 
 @EXPORT = qw (

diff --git a/PhastCons.pm b/PhastCons.pm
@@ -18,6 +18,8 @@ package PhastCons;
 
 require Exporter;
 
+our $VERSION = 1.01;
+
 @ISA = qw (Exporter);
 
 @EXPORT = qw (

diff --git a/PhyloTree.pm b/PhyloTree.pm
@@ -19,6 +19,9 @@ package PhyloTree;
 
 require Exporter;
 
+
+our $VERSION = 1.01;
+
 @ISA = qw (Exporter);
 
 @EXPORT = qw (

diff --git a/Quantas.pm b/Quantas.pm
@@ -18,6 +18,8 @@ package Quantas;
 
 require Exporter;
 
+our $VERSION = 1.01;
+
 @ISA = qw (Exporter);
 
 @EXPORT = qw (

diff --git a/SGE.pm b/SGE.pm
@@ -19,6 +19,9 @@ package SGE;
 
 require Exporter;
 
+
+our $VERSION = 1.01;
+
 @ISA = qw (Exporter);
 
 @EXPORT = qw (

diff --git a/Sam.pm b/Sam.pm
@@ -18,6 +18,8 @@ package Sam;
 
 require Exporter;
 
+our $VERSION = 1.01;
+
 @ISA = qw (Exporter);
 
 @EXPORT = qw (

diff --git a/ScaleFree.pm b/ScaleFree.pm
@@ -20,6 +20,9 @@ require Exporter;
 
 @ISA = qw (Exporter);
 
+our $VERSION = 1.01;
+
+
 @EXPORT = qw (
 	buildHarmonicNumberTable
 	encode

diff --git a/ScanStatistics.pm b/ScanStatistics.pm
@@ -20,6 +20,9 @@ require Exporter;
 
 @ISA = qw (Exporter);
 
+our $VERSION = 1.01;
+
+
 @EXPORT = qw (
 	calcScanStatistic
 );

diff --git a/Sequence.pm b/Sequence.pm
@@ -21,6 +21,10 @@ use Bed;
 
 require Exporter;
 
+
+our $VERSION = 1.01;
+
+
 @ISA = qw (Exporter);
 
 @EXPORT = qw (

diff --git a/Vcf.pm b/Vcf.pm
@@ -18,6 +18,8 @@ package Vcf;
 
 require Exporter;
 
+our $VERSION = 1.01;
+
 @ISA = qw (Exporter);
 
 @EXPORT = qw(

diff --git a/ViennaRNA.pm b/ViennaRNA.pm
@@ -2,6 +2,8 @@ package ViennaRNA;
 
 require Exporter;
 
+our $VERSION = 1.01;
+
 @ISA = qw (Exporter);
 
 @EXPORT = qw (

diff --git a/Wiggle.pm b/Wiggle.pm
@@ -19,6 +19,8 @@ package Wiggle;
 
 require Exporter;
 
+our $VERSION = 1.01;
+
 @ISA = qw (Exporter);
 
 @EXPORT = qw (