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assumed % doublet formation rate #210

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JoannaG88 opened this issue Jul 4, 2024 · 1 comment
Open

assumed % doublet formation rate #210

JoannaG88 opened this issue Jul 4, 2024 · 1 comment

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@JoannaG88
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Hi,
I am trying to use doubletFinder package on my scRNAseq data that was obtained after super loading i.e. assumed higher % of doublets. In the package description and real data example the "% doublet formation rate" is set to 7.5% and stated that it needs to be tailored to your own dataset. However, how do you tailor it, are there any clues or tips for that? I would be super grateful for any advice on that. Many thanks in advance!
@MorticiaGiulia
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I have the same question here.

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@MorticiaGiulia @JoannaG88