Skip to content

Issues: chris-mcginnis-ucsf/DoubletFinder

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

32 Open 164 Closed
32 Open 164 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

issue with running paramsweep
#213 opened Oct 4, 2024 by el-hodiri
DoubletFinder error in Seurat（V4）
#212 opened Sep 23, 2024 by zhenzhenzhou
result of modelHomotypic(NULL) is 0
#211 opened Aug 29, 2024 by hel404
assumed % doublet formation rate
#210 opened Jul 4, 2024 by JoannaG88
1
Need to install 2.0.3 to replicate results based on old scripts.
#208 opened Jun 14, 2024 by JG1ANDONLY
1
Error seu@assays$RNA$counts : $ operator not defined for this S4 class. for doubletFinder( )
#207 opened May 24, 2024 by chingyaousf
4
Error message with DoubleFinder:Error in RunPCA(seu_wdoublets, npcs = length(PCs)) : unused argument (npcs = length(PCs))
#206 opened May 21, 2024 by anitalakatos
doubletFinder for BCR?
#205 opened May 16, 2024 by saramoein372
install failed
#204 opened May 15, 2024 by QIiiiiiii1
3
Error in order(pANN$pANN[1:n_real.cells], decreasing = TRUE)[1:nExp] :
#202 opened May 12, 2024 by wangpenhok
Number of doublets is equal to nExp
#201 opened May 5, 2024 by der4005
bcmvn<-find.pK(sweep.stats) NULL
#199 opened Apr 25, 2024 by ramikheireddine
1
Removing only some doublets with DoubletFinder
#198 opened Apr 15, 2024 by cetinsz
Error in [seu@meta.data](mailto:seu@meta.data) : no applicable method for @ applied to an object of class "list"
#197 opened Apr 14, 2024 by Drizzle63
Error with FindDoublets::paramSweep
#196 opened Apr 1, 2024 by kunleng
add pANN scores to cell metadata
#195 opened Mar 14, 2024 by thayerr
2
unused argument (sct = FALSE) in paramSweep
#194 opened Feb 28, 2024 by lizh0205
2
Error in ParamSweep
#193 opened Feb 17, 2024 by igs0011
4
Compatibility issues of DoubletFinder 2.0.4 with Seurat V4
#192 opened Feb 17, 2024 by zhongguozhiwang
1
Error in .subscript.2ary(x, , j, drop = TRUE) : subscript out of bounds
#189 opened Jan 16, 2024 by Yijia-Jiang
4
Error in installation
#188 opened Jan 12, 2024 by ppkaaqq
Error in h(simpleError(msg, call)) : error in evaluating the argument 'x' in selecting a method for function 't': missing value where TRUE/FALSE needed
#187 opened Jan 6, 2024 by hlcxq1223
Error in paramSweep_v3(scRNA_r, PCs = 1:30, sct = FALSE) : could not find function "paramSweep_v3"
#184 opened Jan 2, 2024 by skkanlei
11
Error: In function [: "j" must not have duplicated values
#183 opened Dec 25, 2023 by alasaa
5
Subscript out of bounds - Running parameter sweep
#182 opened Dec 22, 2023 by rahmaqadeer
4
ProTip! Adding no:label will show everything without a label.