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arabidopsis-api-tair

  • A function which will make your access to tair datasets easier for the arabidopsis research.
  • Run this function and it will run and download the arabidopsis datasets and make the required analysis.
  • It will make all the dictionary with nested lists and tuples which will provide a easy access to the tair dataframe. Y
  • You dont have to go to tair website and check the gene conversion or the uniprot conversions, or the mapping or checking for the coordinates.
  • This provides a nested dictionary with the nested list and tuples and you can simply search them.
  • No need to make the SQL database as it downloads the file and then remove them after the search.
  • This function is a part of the tairaccession package (pip install tairaccession), however you can use this separately.

Gaurav Sablok
University of Potsdam
Potsdam,Germany