- A shell plotting function that extends a ruby framework and plots the metagenomics abundances for checking the abundance distribution.
- It takes the OTU metagenomics abundances and then plot the bar and the histogram to see the distribution of the abundances.
- just run it and it will ask for the file and plots to make.
i am your shell plotter that uses ruby for the plotting for plotting the metagenomics abundances
gem install youplot
you have a series of the abundances or just a single file, if a single abundance then only bar and hist plot is possible
enter the filename for the metagenomics abundance:taxonomy_OTUs
enter the type of the plot:bar
enter the number of the bins:
prepairing the file for the plotting
bar plot analysis of the metagenomics samples OTUs
Gaurav Sablok
University of Potsdam
Potsdam,Germany