- A set of functions which will provide easy access and cleaned gff from tair and uses a dataframe and datascience approach to get the systematic tair ids and their coordinates from the tair 10 gff version.
- It can be applied to any version of the tair for getting the systematic retrival of the tair ids.
- Download the tair 10 or any other gff3 version and use this to make a clean nested iterators of the genomic coordinates.
- It can be applied to any genomic annotation as long as the gff looks like the tair ones.
- This function is a part of the tairaccession package (pip install tairaccession), however you can use this separately and it is completely usable.
Gaurav Sablok
University of Potsdam
Potsdam,Germany