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Merge pull request #27385 from DonatWulf/r-gggenomes
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Add r-gggenomes
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bgruening authored Aug 24, 2024
2 parents 574f602 + f539326 commit c954cdf
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2 changes: 2 additions & 0 deletions recipes/r-gggenomes/bld.bat
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"%R%" CMD INSTALL --build . %R_ARGS%
IF %ERRORLEVEL% NEQ 0 exit /B 1
3 changes: 3 additions & 0 deletions recipes/r-gggenomes/build.sh
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#!/bin/bash
export DISABLE_AUTOBREW=1
${R} CMD INSTALL --build . ${R_ARGS}
110 changes: 110 additions & 0 deletions recipes/r-gggenomes/meta.yaml
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{% set version = '1.0.0' %}
{% set posix = 'm2-' if win else '' %}
{% set native = 'm2w64-' if win else '' %}

package:
name: r-gggenomes
version: {{ version|replace("-", "_") }}

source:
url:
- {{ cran_mirror }}/src/contrib/gggenomes_{{ version }}.tar.gz
- {{ cran_mirror }}/src/contrib/Archive/gggenomes/gggenomes_{{ version }}.tar.gz
sha256: 3cdee64dc9156a0cb3eb5d3bb8b83df751ced28b2b84cc1d545fafda179f7538

build:
merge_build_host: True # [win]
number: 0
noarch: generic
rpaths:
- lib/R/lib/
- lib/
missing_dso_whitelist:
- '*/R.dll' # [win]
- '*/Rblas.dll' # [win]
- '*/Rlapack.dll' # [win]

requirements:
build:
- {{ posix }}zip # [win]
- cross-r-base {{ r_base }} # [build_platform != target_platform]
host:
- r-base >=4.2
- r-colorspace
- r-dplyr
- r-ellipsis
- r-ggplot2 >=3.5.0
- r-jsonlite
- r-magrittr
- r-purrr
- r-readr >=2.0.0
- r-rlang
- r-scales
- r-snakecase
- r-stringr
- r-tibble
- r-tidyr
- r-tidyselect
- r-vctrs
run:
- r-base >=4.2
- r-colorspace
- r-dplyr
- r-ellipsis
- r-ggplot2 >=3.5.0
- r-jsonlite
- r-magrittr
- r-purrr
- r-readr >=2.0.0
- r-rlang
- r-scales
- r-snakecase
- r-stringr
- r-tibble
- r-tidyr
- r-tidyselect
- r-vctrs

test:
commands:
- $R -e "library('gggenomes')" # [not win]
- "\"%R%\" -e \"library('gggenomes')\"" # [win]

about:
home: https://github.com/thackl/gggenomes
license: MIT
summary: An extension of 'ggplot2' for creating complex genomic maps. It builds on the power
of 'ggplot2' and 'tidyverse' adding new 'ggplot2'-style geoms & positions and 'dplyr'-style
verbs to manipulate the underlying data. It implements a layout concept inspired
by 'ggraph' and introduces tracks to bring tidiness to the mess that is genomics
data.
license_family: MIT
license_file:
- '{{ environ["PREFIX"] }}/lib/R/share/licenses/MIT'
- LICENSE

extra:
recipe-maintainers:
- DonatWulf

# Package: gggenomes
# Title: A Grammar of Graphics for Comparative Genomics
# Version: 1.0.0
# Authors@R: c( person("Thomas", "Hackl", email = "t.hackl@rug.nl", role = c("aut", "cre")), person("Markus J.", "Ankenbrand", email = "iimog@iimog.org", role = c("aut")), person("Bart", "van Adrichem", role = c("aut")), person("Kristina", "Haslinger", email = "k.haslinger@rug.nl", role = c("ctb", "sad")))
# Description: An extension of 'ggplot2' for creating complex genomic maps. It builds on the power of 'ggplot2' and 'tidyverse' adding new 'ggplot2'-style geoms & positions and 'dplyr'-style verbs to manipulate the underlying data. It implements a layout concept inspired by 'ggraph' and introduces tracks to bring tidiness to the mess that is genomics data.
# License: MIT + file LICENSE
# URL: https://github.com/thackl/gggenomes
# BugReports: https://github.com/thackl/gggenomes/issues
# Encoding: UTF-8
# LazyData: true
# RoxygenNote: 7.3.1
# VignetteBuilder: knitr
# Depends: R (>= 3.4.2), ggplot2 (>= 3.5.0),
# Imports: vctrs, rlang, dplyr, tidyr, readr (>= 2.0.0), purrr, tibble, stringr, grid, jsonlite, snakecase, magrittr, scales, tidyselect, colorspace, methods, utils, ellipsis
# Suggests: testthat, ggtree, patchwork, Hmisc, knitr, ggrepel, IRanges,
# NeedsCompilation: no
# Packaged: 2024-06-27 07:06:49 UTC; iimog
# Author: Thomas Hackl [aut, cre], Markus J. Ankenbrand [aut], Bart van Adrichem [aut], Kristina Haslinger [ctb, sad]
# Maintainer: Thomas Hackl <t.hackl@rug.nl>
# Repository: CRAN
# Date/Publication: 2024-06-28 09:30:06 UTC

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