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  1. ccdmb/predector ccdmb/predector Public

    Effector prediction pipeline based on protein properties.

    Shell 11 7

  2. panann panann Public

    Pipelines for gene annotation of pangenomes.

    Nextflow 3 2

  3. gffpal gffpal Public

    A flexible library for working with GFF data.

    Python 2 1

  4. pante pante Public

    A pipeline for predicting and masking transposable elements in multiple genomes.

    Groovy 3 10

  5. ccdmb/catastrophy ccdmb/catastrophy Public

    CATAStrophy predicts filamentous plant pathogen lifestyle characteristics based on their CAZyme composition.

    Python 6

  6. mumflow mumflow Public

    A nextflow pipeline to run the mummer pipelines (align genomes, call snps) and process outputs into sane formats.

    Python 4 3