shorten fmriprep maxtime to 1 day 4 hours

dmd · Jan 11, 2024 · 6ab57db · 6ab57db
1 parent cf7df3f
commit 6ab57db
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/micc_fmriprep.py b/micc_fmriprep.py
@@ -330,7 +330,7 @@ def is_dir(dirname):
     if SYSTYPE == "sge":
         sub_cmd = f"{QSUB} -cwd -q fmriprep.q -N {args.jobname} -pe fmriprep {args.ncpus} -w e -R y {filename}".split()
     elif SYSTYPE == "slurm":
-        sub_cmd = f"{SBATCH} --job-name {args.jobname} --output=%x-%j.out --error=%x-%j.err --time 3- --cpus-per-task={args.ncpus} --mem={args.ramsize}G {filename}".split()
+        sub_cmd = f"{SBATCH} --job-name {args.jobname} --output=%x-%j.out --error=%x-%j.err --time 1-4 --cpus-per-task={args.ncpus} --mem={args.ramsize}G {filename}".split()
     print(" ".join(sub_cmd))
     if args.dry_run:
         print("NOT running; dry run only.")