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Updating tools/featurecounts from version 2.0.3 to 2.0.6
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planemo-autoupdate committed Oct 21, 2024
1 parent 1550e33 commit b81656a
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions tools/featurecounts/featurecounts.xml
Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
<tool id="featurecounts" name="featureCounts" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.09">
<description>Measure gene expression in RNA-Seq experiments from SAM or BAM files</description>
<macros>
<token name="@TOOL_VERSION@">2.0.3</token>
<token name="@VERSION_SUFFIX@">2</token>
<token name="@TOOL_VERSION@">2.0.6</token>
<token name="@VERSION_SUFFIX@">0</token>

<macro name="conditional_gff_opions">
<param name="gff_feature_type" type="text" value="exon" argument="-t" label="GFF feature type filter" help="Specify the feature type. Only rows which have the matched matched feature type in the provided GTF annotation file will be included for read counting. `exon' by default."/>
Expand All @@ -15,7 +15,7 @@
</xrefs>
<requirements>
<requirement type="package" version="@TOOL_VERSION@">subread</requirement>
<requirement type="package" version="1.16.1">samtools</requirement>
<requirement type="package" version="1.21">samtools</requirement>
</requirements>

<version_command>featureCounts -v 2&gt;&amp;1 | grep .</version_command>
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