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Increase allocations for funannotate_annotate and fasttree #38

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merged 1 commit into from
Aug 21, 2023
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Increase allocations for funannotate_annotate and fasttree #38

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10 changes: 7 additions & 3 deletions tools.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -1166,7 +1166,11 @@ tools:
toolshed.g2.bx.psu.edu/repos/iuc/fastp/fastp/.*:
cores: 4
toolshed.g2.bx.psu.edu/repos/iuc/fasttree/fasttree/.*:
mem: 8
mem: 30
rules:
- id: fasttree_small_input_rule
if: input_size < 0.005
mem: 8
toolshed.g2.bx.psu.edu/repos/iuc/featurecounts/featurecounts/.*:
cores: 2
mem: 8
Expand All @@ -1175,8 +1179,8 @@ tools:
toolshed.g2.bx.psu.edu/repos/iuc/filtlong/filtlong/.*:
mem: 50
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_annotate/funannotate_annotate/.*:
cores: 4
mem: 15
cores: 8
mem: 40
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_predict/funannotate_predict/.*:
cores: 12
mem: 12
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