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funannotate_annotate RAM #51

Merged
merged 4 commits into from
Dec 18, 2023
Merged

funannotate_annotate RAM #51

merged 4 commits into from
Dec 18, 2023

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TomHarrop
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This is failing on a large-ish genome on GA

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@TomHarrop
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@bgruening we've only had one of the last 200 jobs complete (and lots fail) where the input size was over 3250 MB. If this doesn't work I'll try using the number of lines in the gbk.

@cat-bro
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cat-bro commented Dec 18, 2023

@TomHarrop input_size is in GB units

Would it be OK to try 62 as the large-input RAM instead of 64? 64 is going to be awkward on GA because most of the worker nodes do not have this.

@TomHarrop
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@cat-bro thanks, updated

@nuwang nuwang merged commit 3be0403 into galaxyproject:main Dec 18, 2023
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4 participants