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add a rule to interproscan for more memory #57

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merged 2 commits into from
Oct 28, 2024
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bgruening
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- id: interproscan_metagenome_input_rule
if: input_size > 0.9
cores: 10
mem: 80
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Is it at all possible to put that to 100 or not really?

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It would be possible, but we should be as close to real-world as possible

@nuwang nuwang requested a review from cat-bro April 27, 2024 14:02
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Input sizes of over 100MB are unusual. On GA there has been only one OOM for interproscan and the input was 2.6GB.

LGTM

@bgruening bgruening merged commit ee858e7 into main Oct 28, 2024
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@bgruening bgruening deleted the interpro_memory branch October 28, 2024 08:03
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3 participants