This repository outlines a streamlined pipeline for DESeq2-based differential expression analysis. It covers pre-filtering, Rlog transformation, DESeq modeling, visualization with MA plots, PCA, and heatmaps, plus export-ready results for GSEA and downstream analysis.
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This repository outlines a streamlined pipeline for DESeq2-based differential expression analysis. It covers pre-filtering, Rlog transformation, DESeq modeling, visualization with MA plots, PCA, and heatmaps, plus export-ready results for GSEA and downstream analysis.
georgejr45/DESeq2
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This repository outlines a streamlined pipeline for DESeq2-based differential expression analysis. It covers pre-filtering, Rlog transformation, DESeq modeling, visualization with MA plots, PCA, and heatmaps, plus export-ready results for GSEA and downstream analysis.
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