v3.0.0 [2018-10-10]

ITSx : tool available for selecting and trimming ITS sequences based on ITSx tool
Affiliation Postprocess : resolve ambiguities due to inclusiv ITS, and aggregated OTU based on
taxonomic affiliations

Preprocess : keep and filter non overlapped reads (particularly important for amplicon polymorphe in length)
Affiliation : non overlapped read generate FROGS_combined OTU that are affiliated thanks to Needl (http://emboss.sourceforge.net/apps/release/6.6/emboss/apps/needleall.html) global alignment

General : Use GALAXY_SLOTS variable in XML.
Upadate version dependancies
Remove redirection to /dev/null
Update test/test.sh
Update XML doc
Update graphical charter of HTML outputs
HTML reports now work on secured server by using of https instead of http to all JavaScript and CSS URLs (#34).
Preprocess : add VSEARCH and PEAR (https://sco.h-its.org/exelixis/web/software/pear/ only for command line usage because of PEAR licence) options to merge reads
Clustering : deal with artificially combined reads
FROGSSTAT tools do not call anymore external script from urls. Additionnal library dependancies
added : https://github.com/mahendra-mariadassou/phyloseq-extended/releases
FROGSSTAT import : can take FROGS specific biom file
FROGS TSV_to_Biom : keeps original type of metadata (float, int or list instead of string)
remove quotes added by Excel when exporting abundance tsv file in text file

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