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sckott committed Mar 19, 2024
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{"repos": [{"name": "rcromwell", "private": false, "fork": false, "description": "R client for interacting with Cromwell with WDL workflows", "html_url": "https://github.com/getwilds/rcromwell", "topics": ["r", "r-package", "rstats", "wilds-r", "workflow", "workflow-engine", "workflow-management"]}, {"name": "tg-wdl-SRA-STAR", "private": false, "fork": false, "description": "Workflow to download paired fastqs from SRA and pass through STAR 2 pass", "html_url": "https://github.com/getwilds/tg-wdl-SRA-STAR", "topics": ["wdl-workflow", "wilds-wdl"]}, {"name": "tg-wdl-cellRanger", "private": false, "fork": false, "description": "A basic starting point for a cell ranger workflow", "html_url": "https://github.com/getwilds/tg-wdl-cellRanger", "topics": ["wdl-workflow", "wilds-wdl"]}, {"name": "tg-star-deseq2-wdl", "private": false, "fork": false, "description": "A demo repo to help folks run Star on RNA seq data and do DEseq2", "html_url": "https://github.com/getwilds/tg-star-deseq2-wdl", "topics": ["wdl-workflow", "wilds-wdl"]}, {"name": "sixtyfour", "private": false, "fork": false, "description": "\ud83d\ude9a CEO, entrepreneur", "html_url": "https://github.com/getwilds/sixtyfour", "topics": ["aws", "aws-billing", "r", "r-pkg", "rstats", "wilds-r"]}, {"name": "guide", "private": false, "fork": false, "description": "WILDS Dev Guide", "html_url": "https://github.com/getwilds/guide", "topics": ["documentation"]}, {"name": "badges", "private": false, "fork": false, "description": "WILDS Badges", "html_url": "https://github.com/getwilds/badges", "topics": ["utilities"]}, {"name": "diy-cromwell-server", "private": false, "fork": true, "description": "A repo containing instructions for running a Cromwell server on Gizmo at the Fred Hutch. (Contact Amy Paguirigan for questions)", "html_url": "https://github.com/getwilds/diy-cromwell-server", "topics": ["infrastructure-services"]}, {"name": "shiny-cromwell", "private": false, "fork": true, "description": "Shiny app for interacting with the Fred Hutch instances of Cromwell. Contact Amy Paguirigan", "html_url": "https://github.com/getwilds/shiny-cromwell", "topics": ["shiny-apps", "wilds-r"]}, {"name": "makefiles", "private": false, "fork": false, "description": "Makefile templates for WILDS projects", "html_url": "https://github.com/getwilds/makefiles", "topics": ["utilities"]}, {"name": "getwilds.github.io", "private": false, "fork": false, "description": "WILDS Website", "html_url": "https://github.com/getwilds/getwilds.github.io", "topics": []}, {"name": "cancerprof", "private": false, "fork": false, "description": "API Client for State Cancer Profiles", "html_url": "https://github.com/getwilds/cancerprof", "topics": ["wilds-r"]}, {"name": "proofr", "private": false, "fork": false, "description": "Client for the PROOF API", "html_url": "https://github.com/getwilds/proofr", "topics": ["r-package", "wilds-r"]}, {"name": "fastq-to-cram", "private": false, "fork": false, "description": "Self-contained WDL workflow that converts a WGS FASTQ file into an unmapped CRAM file", "html_url": "https://github.com/getwilds/fastq-to-cram", "topics": ["wdl-workflow", "wilds-wdl"]}, {"name": "shinyauthr", "private": false, "fork": true, "description": "R package with shiny authentication modules, fork of shinyauthr", "html_url": "https://github.com/getwilds/shinyauthr", "topics": []}, {"name": "bs", "private": false, "fork": false, "description": "Bootstrap Components for DASL Projects", "html_url": "https://github.com/getwilds/bs", "topics": ["utilities", "wilds-r"]}, {"name": "wilds-docker-library", "private": false, "fork": false, "description": "Central location for all Docker containers associated with WILDS workflows", "html_url": "https://github.com/getwilds/wilds-docker-library", "topics": ["containers", "wilds-docker"]}, {"name": "wdl-test-workflows", "private": false, "fork": true, "description": "A repo containing workflows written in WDL to test using the Fred Hutch Cromwell configuration. ", "html_url": "https://github.com/getwilds/wdl-test-workflows", "topics": []}, {"name": ".github", "private": false, "fork": false, "description": null, "html_url": "https://github.com/getwilds/.github", "topics": []}, {"name": "wdl-101", "private": false, "fork": false, "description": "This is the repository for the WDL and JSON files accompanying the WDL 101 course.", "html_url": "https://github.com/getwilds/wdl-101", "topics": []}, {"name": "registry", "private": false, "fork": false, "description": "WILDS Repo Registry", "html_url": "https://github.com/getwilds/registry", "topics": []}], "updated": "2024-03-19T05:11:02.122051+00:00"}
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