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Oscar tools update (#81)
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* Added logos for gplas2 and plasmidCC

* Update tools.yaml

Updated gplas to gplas2 and added plasmidCC

* Updated plasmidCC logo

* Update tools.yaml

updated image link

* Delete images/plasmidCC_temporary_logo.png

deleted wrong plasmidCC logo

* Add files via upload

* Add files via upload

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ojordan5 authored Apr 11, 2024
1 parent 9f05b68 commit 4c3d369
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18 changes: 13 additions & 5 deletions _data/tools.yaml
Original file line number Diff line number Diff line change
@@ -1,9 +1,9 @@
- name: Gplas
- name: gplas2
group: wgs
image: images/gplas_logo.png
link: https://gitlab.com/mmb-umcu/gplas
image: images/gplas2_logo.png
link: https://gitlab.com/mmb-umcu/gplas2
description: gplas is a tool to bin plasmid-predicted contigs based on sequence composition, coverage and assembly graph information. This tool extends the possibility of accurately binning predicted plasmid contigs into several discrete plasmid components.
repo: mmb-umcu/gplas
repo: mmb-umcu/gplas2
tags:
- Plasmid

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repo: mmb-umcu/plasmidec
tags:
- Plasmid


- name: plasmidCC
group: wgs
image: images/plasmidCC_tmp_logo.png
link: https://gitlab.com/mmb-umcu/plasmidCC
description: "plasmidCC is a plasmid classification tool that uses Centrifuge to predict the origin of contigs (plasmid or chromosome). Out of the box, plasmidCC can be used to predict plasmid contigs of a selected number of species. By supplying a custom Centrifuge database, plasmidCC can be used for any desired species."
repo: mmb-umcu/plasmidCC
tags:
- Plasmid

- name: Bactofidia
group: wgs
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