A Snakemake workflow for removing reads from lab contaminations by filtering with the vector sequences in the UniVec database. This workflow assumes that (sequencing) adapters habe already been trimmed from input reads.
The usage of this workflow is described in the Snakemake Workflow Catalog.
If you use this workflow in a paper, don't forget to give credits to the authors by citing the URL of this (original) repository and its DOI (see above).