Our project aims to design a metabolic platform that simulates changes in the metabolic network to provide comprehensive results for the researcher.
You can take the data from our platform, search the pathways between molecules, and perform the metabolic simulations mentioned above.
Our functions hosted on the web are divided into three main modules: Synthetic Bay (DB), Pathway Finder (PF), and Deep Metabolic Simulation (DMS).
Through ‘www.tjigem.com’ or ‘https://www.tjigem.com’, we can enter the Home page of the project.
On this page, users can get our project’s leading content and this manual (Handbook) of the software. At the same time, they can enter the three functional pages by clicking the navigation card. If you want to get more details, read handbook.pdf please!
try 'www.tjigem.com/database', 'www.tjigem.com/pf', 'www.tjigem.com/hms' to enter the functional pages.
Meanwhile, you will find some alternative parameters to get more different results in our DMS code. You can choose better value or functions according to your demand.
If you are familiar with Docker, just build our software with the Dockerfile in our repo. We will instruct you how to deploy. For more details, read How_To_Deploy.md please!
You can visit our wiki page to know more information about our team and project:
https://2020.igem.org/Team:Tongji_Software