Computational biologist working on evaluation, safety, and grounding for AI in the life sciences
Weill Cornell Medicine · spaceflight, single-cell, and perturbation biology
I build the evidence and evaluation layer for AI in biology: experiments that generate hard biological data, benchmarks that measure what models actually know, and retrieval or post-training systems that make their limits explicit.
Evaluation
grounding-atlasmeasures whether biological properties recoverable from model states are also expressed in model outputs across biological representations.verify-or-truststudies how a general model should trust, verify, or defer when using fallible perturbation-model outputs.causalatlastests when perturbation foundation models outperform simple baselines and how assay cost and scientific objectives shape their useful deployment regimes.agentic-drug-discovery-systempackages CTDBench v0.2, verifier contracts, and an audited retrospective discovery slice focused on sickle cell disease.LabCraft-Evalis an Inspect AI environment for evaluating tool-using agents on molecular microbiology protocols in a seeded laboratory simulator, with deterministic trajectory scoring.sci-agent-verification-cascadeis a testbed for a failure in scientific AI handoffs, where a claim loses its source, uncertainty, or required verification as it passes between agents, and tests a claim receipt plus a runtime gate against it.SpaceOmicsBenchis a multi-omics benchmark for spaceflight data: 21 ML tasks, 9 modalities, and a 100-question model evaluation.
Safety
narrow-model-safety-evalasks whether narrow scientific models encode actionable biology, measuring ESM-2 and ProteinMPNN directly rather than testing whether a chat model refuses text.bio-overrefusal-v0.1measures the opposite failure with 201 domain-expert-authored, tier-annotated research queries, so the cost of refusing legitimate work is quantified alongside the cost of answering.llm-sfm-safety-evalevaluates refusal calibration when a general model interprets science foundation model outputs, across 24.3K outcome records.bio-sfm-trust-auditaudits trust routing where a general LLM sits above specialist protein, genome, and single-cell models and has to decide what to accept.protein-label-integrity-evaltests whether a model notices a hazardous sequence stored under a benign-looking label, across five Claude versions.constitutional-bioguardis a leakage-clean harness for biosafety guard models and an honest case study: the guard trained here is Pareto-dominated by a smaller open model, and the repository says so.
Negative evidence
- NegBioDB / NullAtlas is a private, release-gated biomedical negative-results research program supported by Anthropic's AI for Science program. Its public
negbiodb-safety-calibrationcompanion reports aggregate, non-record-level calibration results across five biomedical domains.
Post-training
- I build and diagnose SFT, DPO, GRPO, and QLoRA workflows for biological evaluation tasks. A recurring result is that some evidence is better supplied through retrieval and deterministic checks than learned through weight updates.
- A bounded public example,
BioReview_Training, publishes QLoRA training code and committed held-out v3 summaries; the 8B+9B ensemble reaches an F1 score of 0.704.
At Weill Cornell Medicine, I lead spaceflight research and co-founded the SOMA consortium, which spans more than 100 institutions across 25+ countries. I came to AI evaluation from drug discovery, single-cell genomics, and Perturb-seq. I hold a Ph.D. from KAIST and am an inventor on two licensed patents.


