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🔬 Python Scripts for applications in Natural Sciences (Physics, Biology, Chemistry). Updating on a regular basis.

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🔬Python-Computational-Natural-Sciences

4

Getting Started

The Jupyter notebooks are accessible in various ways

  • Online as static web pages
  • Online for interactive usage with binder
  • Local for interactive usage on the user's computer by cloning / downloading the repository from https://github.com/jimmyg1997/Python-Computational-Natural-Sciences
  • Other online services (e.g. Google Colaboratory, Microsoft Azure, ...) provide environments for interactive execution of Jupyter notebooks as well. Local execution on your computer requires a local Jupyter/IPython installation.

Concept

Natural science is a branch of science concerned with the description, prediction, and understanding of natural phenomena, based on empirical evidence from observation and experimentation.

Natural science can be divided into two main branches: life science and physical science. Life science is alternatively known as biology, and physical science is subdivided into branches: physics, chemistry, Earth science, and astronomy.

The present notebooks cover fundamental aspects of physics, chemistry and biology. A focus is laid on a mathematical treatise. The discussion of the mathematical background is important to understand the underlying principles in a more general manner.

1. BIOLOGY CONTENTS

The areas of Biology covered will be :

  • Multi-omics integration
  • Proteomics
  • Generative models
  • Genomics
  • Variant calling
  • Gene expression
  • Imaging and gene expression
  • Predicting enhancers and regulatory regions
  • Non-coding RNA
  • Single-cell applications
  • Population genetics
  • Systems biology
  • Neuroscience

2. PHYSICS CONTENTS

The areas of Physics covered will be :

  • Classical mechanics
    • Newton's laws of motion
    • Lagrangian mechanics
    • Hamiltonian mechanics
    • Kinematics
    • Statics
    • Dynamics
    • Chaos Theory
    • Acoustics
    • Fluid dynamics
    • Continuum mechanics
  • Electromagnetism
    • Electrostatics
    • Electrodynamics
    • Electricity
    • Magnetism
    • Magnetostatics
    • Maxwell's equations
    • Optics
  • Thermodynamics& statistical mechanics
    • Heat engine
    • Kinetic theory
  • Quantum mechanics
    • Path integral formulation
    • Scattering theory
    • Schrödinger equation
    • Quantum field theory
    • Quantum statistical mechanics
  • Relativity Special relativity
    • General relativity
    • Einstein field equations

3. PHYSICS CONTENTS

The areas of Chemistry covered will be :

  • Physical chemistry
  • Organic chemistry
  • Inorganic chemistry
  • Analytical chemistry
  • Biochemistry

Topics covered so far

1. BIOLOGY

2. PHYSICS

  • Electromagnetism
    • Optics : The study of how light behaves with mirrors (reflect light), lenses (bend light), prisms (seperate light)
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3. CHEMISTRY

Libraries used 🚧

BIOLOGY

PHYSICS

CHEMISTRY

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