Update actions, sphinx version and build docs for every PR

.github/workflows/docs.yml

@@ -2,8 +2,13 @@
 name: Publish docs
 
 on:
+  # For manual ref
+  workflow_dispatch: {}
   push:
-    branches: [main]
+    branches: [main, develop]
+  pull_request:
+    types: [opened, synchronize, edited, labeled, unlabeled]
+    branches: [main, develop]
 
 # Needed for publishing to Github Pages
 permissions:
@@ -22,7 +27,7 @@ jobs:
       url: ${{ steps.deployment.outputs.page_url }}
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - name: BEE Install
         run: |
           sudo apt-get update
@@ -36,6 +41,8 @@ jobs:
         run: |
           poetry run make -C docs/sphinx html
       - name: Upload
+        # Only do the upload if this is on main
+        if: ${{ github.ref == 'refs/heads/main' }}
         uses: actions/upload-pages-artifact@v1
         with:
           path: docs/sphinx/_build/html

.github/workflows/integration.yml

@@ -25,7 +25,7 @@ jobs:
     # available on 20.04
     runs-on: ubuntu-22.04
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - name: Install and Configure
         run: |
           . ./ci/env.sh

.github/workflows/pylama.yml

@@ -15,7 +15,7 @@ jobs:
     name: PyLama Lint
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - name: Lint
         run: |
           pip install pylama==8.4.1 pyflakes==3.0.1 pylint==2.15.9 pydocstyle==6.1.1 2>&1 >/dev/null

.github/workflows/unit-tests.yml

@@ -23,7 +23,7 @@ jobs:
     # available on 20.04
     runs-on: ubuntu-22.04
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - name: Install and Configure
         run: |
           . ./ci/env.sh

pyproject.toml

@@ -90,7 +90,7 @@ pylint = "2.15.9"
 pytest = "7.2.0"
 pytest-mock = "3.3.1"
 # This is commented out until we can figure out why it's causing `poetry update` to loop forever
-sphinx = "^2.1"
+sphinx = "^6"
 sphinx-rtd-theme = "^1.0"
 cwltool = "^3.0.20200324120055"