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Create MagsAnalysis-invalid-float-for-16s.yaml
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aclum authored Oct 18, 2024
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#this is an invalid example because num_16s is a float instead of an integer
input_contig_num: 2273412
too_short_contig_num: 2005162
low_depth_contig_num: 0
unbinned_contig_num: 241036
binned_contig_num: 27214
type: nmdc:MagsAnalysis
mags_list:
- bin_name: bins.40
number_of_contig: 44
completeness: 97.3
contamination: 3.38
total_bases: 0
gene_count: 20
bin_quality: MQ
num_16s: 6.5
num_5s: 0
num_23s: 0
num_tRNA: 0
gtdbtk_domain: Bacteria
gtdbtk_phylum: Verrucomicrobiota
gtdbtk_class: Verrucomicrobiae
gtdbtk_order: Pedosphaerales
gtdbtk_family: UBA11358
gtdbtk_genus: UBA11358
gtdbtk_species: UBA11358 abc
members_id:
- nmdc:wfmgas-13-56028x05.1_7_c1
- nmdc:wfmgas-13-56028x05.1_9_c1
eukaryotic_evaluation:
type: nmdc:EukEval
completeness: 14.71
contamination: 8.82
ncbi_lineage_tax_ids: "1-131567-2759-2611352-33682-191814-2603949"
ncbi_lineage: "root,cellular organisms,Eukaryota,Discoba,Euglenozoa,Diplonemea,Diplonemidae"

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