Merge branch 'release/0.3.6' #8
Workflow file for this run
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| name: Publish Docker image to ghcr.io | |
| on: | |
| push: | |
| tags: | |
| - "*" | |
| jobs: | |
| push_to_registries: | |
| name: Build and publish Docker image | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out the repo | |
| uses: actions/checkout@v3 | |
| - name: Set up QEMU | |
| uses: docker/setup-qemu-action@v2 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v2 | |
| - name: Prepare | |
| # In this preparation step, a few configurations are made | |
| # according to tags that will be used to export the image | |
| # for Docker Hub, as well as the name of the image itself | |
| id: prep | |
| run: | | |
| DOCKER_IMAGE=ghcr.io/msk-access/genotype_variants | |
| VERSION=noop | |
| if [ "${{ github.event_name }}" = "schedule" ]; then | |
| VERSION=nightly | |
| elif [[ $GITHUB_REF == refs/tags/* ]]; then | |
| VERSION=${GITHUB_REF#refs/tags/} | |
| elif [[ $GITHUB_REF == refs/heads/* ]]; then | |
| VERSION=$(echo ${GITHUB_REF#refs/heads/} | sed -r 's#/+#-#g') | |
| fi | |
| TAGS="${DOCKER_IMAGE}:${VERSION}" | |
| if [[ $VERSION =~ ^[0-9]{1,3}\.[0-9]{1,3}\.[0-9]{1,3}$ ]]; then | |
| MINOR=${VERSION%.*} | |
| MAJOR=${MINOR%.*} | |
| TAGS="$TAGS,${DOCKER_IMAGE}:latest" | |
| elif [[ $VERSION =~ ^v[0-9]{1,3}\.[0-9]{1,3}\.[0-9]{1,3}$ ]]; then | |
| VERSION=$(echo ${VERSION#v}) | |
| TAGS="${DOCKER_IMAGE}:${VERSION}" | |
| elif [ "${{ github.event_name }}" = "push" ]; then | |
| TAGS="$TAGS,${DOCKER_IMAGE}:sha-${GITHUB_SHA::8}" | |
| fi | |
| echo ::set-output name=version::${VERSION} | |
| echo ::set-output name=tags::${TAGS} | |
| - name: Login to GitHub Container Registry | |
| #if: github.event_name != 'pull_request' | |
| uses: docker/login-action@v2 | |
| with: | |
| registry: ghcr.io | |
| username: ${{ github.repository_owner }} | |
| password: ${{ secrets.RS_PAT }} | |
| - name: Push to GitHub Packages | |
| uses: docker/build-push-action@v3 | |
| with: | |
| context: . | |
| file: ./Dockerfile | |
| push: true | |
| tags: ${{ steps.prep.outputs.tags }} | |
| build-args: | | |
| GENOTYPE_VARIANTS_VERSION=${{ steps.prep.outputs.version }} | |
| labels: | | |
| org.opencontainers.image.title=${{ github.event.repository.name }} | |
| org.opencontainers.image.description=${{ github.event.repository.description }} | |
| org.opencontainers.image.version=${{ steps.prep.outputs.version }} |