add correct fastq list step after create folder

mskcc · Apr 15, 2024 · 9341c6c · 9341c6c
1 parent 90da28e
commit 9341c6c
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/scripts/organise_fastq_split_by_lane.py b/scripts/organise_fastq_split_by_lane.py
@@ -92,7 +92,7 @@ def correct_fastq_list_csv(demux_reports_dir):
     demux_dir = sys.argv[2]
     if demux_type == "create":
         create_fastq_folders(demux_dir)
-        # add correct fastq list step?
+        correct_fastq_list_csv(demux_dir+"/Reports")
     elif demux_type == "correct":
         correct_sample_folder_name(demux_dir)
     else: