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updated local modules-subworkflows
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Daniel-VM committed Mar 21, 2024
1 parent 48ea030 commit 655010f
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Showing 2 changed files with 3 additions and 5 deletions.
6 changes: 3 additions & 3 deletions modules/local/dfast.nf
Original file line number Diff line number Diff line change
Expand Up @@ -2,10 +2,10 @@ process DFAST {
tag "$meta.id"
label 'process_medium'

conda "bioconda::dfast=1.2.20"
conda "bioconda::dfast=1.2.21"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/dfast:1.2.20--h43eeafb_0' :
'biocontainers/dfast:1.2.20--h43eeafb_0' }"
'https://depot.galaxyproject.org/singularity/dfast:1.2.21--h43eeafb_0' :
'biocontainers/dfast:1.2.21--h43eeafb_0' }"

input:
tuple val(meta), path(fasta)
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2 changes: 0 additions & 2 deletions subworkflows/local/utils_nfcore_bacass_pipeline/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -197,7 +197,6 @@ def genomeExistsError() {
// Generate methods description for MultiQC
//
def toolCitationText() {
// TODO nf-core: Optionally add in-text citation tools to this list.
// Can use ternary operators to dynamically construct based conditions, e.g. params["run_xyz"] ? "Tool (Foo et al. 2023)" : "",
// Uncomment function in methodsDescriptionText to render in MultiQC report
def citation_text = [
Expand Down Expand Up @@ -226,7 +225,6 @@ def toolCitationText() {
}

def toolBibliographyText() {
// TODO nf-core: Optionally add bibliographic entries to this list.
// Can use ternary operators to dynamically construct based conditions, e.g. params["run_xyz"] ? "<li>Author (2023) Pub name, Journal, DOI</li>" : "",
// Uncomment function in methodsDescriptionText to render in MultiQC report
def reference_text = [
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