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New module: SoupX ambient RNA removal #16578

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New module: SoupX ambient RNA removal

New module: SoupX ambient RNA removal #16578

Run time

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Job Run time
pytest-changes
5s
pre-commit
44s
editorconfig
11s
prettier
31s
nf-test-changes
1m 1s
pytest
0s
nf-core-lint-modules (fasta_newick_epang_gappa)
18s
nf-core-lint-modules (utils_nextflow_pipeline)
29s
nf-core-lint-modules (parabricks/fq2bam)
1s
nf-core-lint-modules (mcstaging/phenoimager2mc)
1s
nf-core-lint-modules (soupx)
1s
nf-core-lint-modules (cellbender/removebackground)
1s
nf-core-lint-modules (svdb/merge)
1s
nf-core-lint-modules (parabricks/fq2bammeth)
1s
nf-test (subworkflows/nf-core/fasta_newick_epang_gappa, docker_self_hosted)
1s
nf-test (subworkflows/nf-core/fasta_newick_epang_gappa, singularity)
1s
nf-test (modules/nf-core/mcstaging/phenoimager2mc, docker_self_hosted)
1s
nf-test (modules/nf-core/mcstaging/phenoimager2mc, singularity)
1s
nf-test (modules/nf-core/soupx, conda)
1s
nf-test (modules/nf-core/soupx, docker_self_hosted)
1s
nf-test (modules/nf-core/soupx, singularity)
1s
nf-test (modules/nf-core/cellbender/removebackground, conda)
1s
nf-test (modules/nf-core/cellbender/removebackground, docker_self_hosted)
1s
nf-test (modules/nf-core/cellbender/removebackground, singularity)
1s
nf-test (modules/nf-core/svdb/merge, conda)
1s
nf-test (modules/nf-core/svdb/merge, docker_self_hosted)
1s
nf-test (modules/nf-core/svdb/merge, singularity)
1s
nf-test (subworkflows/nf-core/utils_nextflow_pipeline, conda)
1s
nf-test (subworkflows/nf-core/utils_nextflow_pipeline, docker_self_hosted)
1s
nf-test (subworkflows/nf-core/utils_nextflow_pipeline, singularity)
1s
confirm-pass
1s
3m 42s